Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, plasma membrane, golgi, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | nucleus | 70.74 | 61.66 |
| GSMUA_Achr1P04100_001 | Banana | nucleus | 58.89 | 51.17 |
| GSMUA_Achr9P18800_001 | Banana | nucleus | 50.63 | 48.87 |
| GSMUA_Achr4P24780_001 | Banana | nucleus | 54.94 | 45.74 |
| GSMUA_Achr5P19950_001 | Banana | nucleus, plastid | 54.04 | 45.61 |
| GSMUA_Achr2P11910_001 | Banana | nucleus | 49.55 | 43.12 |
| GSMUA_Achr4P29130_001 | Banana | nucleus | 51.89 | 41.34 |
| Zm00001d032453_P001 | Maize | nucleus | 55.12 | 39.16 |
| TraesCS4B01G396900.1 | Wheat | nucleus | 48.29 | 38.87 |
| GSMUA_Achr2P00580_001 | Banana | nucleus | 48.11 | 38.23 |
| EER91374 | Sorghum | nucleus | 55.3 | 38.17 |
| Zm00001d013849_P001 | Maize | nucleus | 52.96 | 37.97 |
| HORVU1Hr1G046940.4 | Barley | nucleus | 54.22 | 36.47 |
| TraesCS1B01G203300.2 | Wheat | nucleus | 53.14 | 36.36 |
| TraesCS1A01G176700.2 | Wheat | nucleus | 53.32 | 36.35 |
| KXG40355 | Sorghum | nucleus, plastid | 50.81 | 36.24 |
| TraesCS1D01G162400.1 | Wheat | nucleus, plastid | 52.78 | 35.99 |
| Zm00001d027335_P001 | Maize | nucleus | 50.81 | 34.98 |
| HORVU4Hr1G089120.1 | Barley | nucleus, plastid | 49.73 | 34.93 |
| TraesCS5A01G558200.1 | Wheat | nucleus, plastid | 48.83 | 34.65 |
| TraesCSU01G029700.1 | Wheat | nucleus | 48.65 | 34.43 |
| GSMUA_Achr7P04610_001 | Banana | nucleus | 22.8 | 26.24 |
| GSMUA_AchrUn_... | Banana | nucleus | 9.52 | 24.77 |
| GSMUA_Achr8P07630_001 | Banana | nucleus | 16.88 | 23.62 |
| GSMUA_Achr1P24120_001 | Banana | nucleus | 25.49 | 21.23 |
| GSMUA_AchrUn_... | Banana | nucleus | 23.88 | 19.05 |
| GSMUA_AchrUn_... | Banana | nucleus | 12.21 | 14.5 |
| GSMUA_Achr8P11770_001 | Banana | nucleus | 2.69 | 8.77 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P11760_001 | EnsemblPlants:GSMUA_Achr8T11760_001 | EnsemblPlantsGene:GSMUA_Achr8G11760_001 | Gene3D:1.10.10.60 | InterPro:IPR017877 | InterPro:Myb-like_dom |
| PANTHER:PTHR21654 | PANTHER:PTHR21654:SF13 | PFAM:PF13837 | PFscan:PS50090 | SEG:seg | SignalP:SignalP-noTM |
| UniParc:UPI000294E001 | UniProt:M0TPM9 | MapMan:15.5.20 | : | : | : |
Description
AT-GTL1, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G11760_001]
Coordinates
chr8:-:8510525..8513108
Molecular Weight (calculated)
61257.3 Da
IEP (calculated)
9.123
GRAVY (calculated)
-0.987
Length
557 amino acids
Sequence
(BLAST)
(BLAST)
001: MQPSRRILSF SFIMVVAVSR KLAELGYKRT AKKCKEKFEN VHKYYKRTKE GRAGRQDGKA YRFFSQLEAL HGSGGGGANT TAATPLAAAS PTTFIAMPAR
101: VAPEFGPRGI SSSAAAAAAA GGISFSSNSS SSSSSESDDE ETQVAGGSRE GRKRKRRGGS RSRRRMMAFF EGLMQQVMER QEAMQQRFLE AIEKREQDRM
201: KREEAWRLQE MSRLSREQEL LVQERAVAAS RDTAVISYLQ KISGQTIPLP AMPATSIAPL PQSSYTPPQQ QQPPSKPQHH TQVTDPPSSS RWPKAEVHAL
301: IKLRSGLDSR YQEAGPKGPL WEEISAGMRR LGYNRNAKRC KEKWENINKY FKKVKESSKN RPEDSKTCPY FHQLDALYRK KLFGSSSGSG GGGSITVGIP
401: QQQEQEANRS PTSEEQHRQQ PPAEAPGKSG NDNGNGNGGN AEAGGGPAGI CAQTSNGGPP PSFFDEGMKK PEDIVKELMD QRRHQPVMGD YDKMDEPDSD
501: NLEDDDDDDD DDNDDDDDED RKMQYKIQFQ RQNVSGGGGG NSSTTATAPG SFLAIVQ
101: VAPEFGPRGI SSSAAAAAAA GGISFSSNSS SSSSSESDDE ETQVAGGSRE GRKRKRRGGS RSRRRMMAFF EGLMQQVMER QEAMQQRFLE AIEKREQDRM
201: KREEAWRLQE MSRLSREQEL LVQERAVAAS RDTAVISYLQ KISGQTIPLP AMPATSIAPL PQSSYTPPQQ QQPPSKPQHH TQVTDPPSSS RWPKAEVHAL
301: IKLRSGLDSR YQEAGPKGPL WEEISAGMRR LGYNRNAKRC KEKWENINKY FKKVKESSKN RPEDSKTCPY FHQLDALYRK KLFGSSSGSG GGGSITVGIP
401: QQQEQEANRS PTSEEQHRQQ PPAEAPGKSG NDNGNGNGGN AEAGGGPAGI CAQTSNGGPP PSFFDEGMKK PEDIVKELMD QRRHQPVMGD YDKMDEPDSD
501: NLEDDDDDDD DDNDDDDDED RKMQYKIQFQ RQNVSGGGGG NSSTTATAPG SFLAIVQ
001: MSGNSEGLLE SSGGGVGGSV EEEKDMKMEE TGEGAGSGGN RWPRPETLAL LRIRSEMDKA FRDSTLKAPL WEEISRKMME LGYKRSSKKC KEKFENVYKY
101: HKRTKEGRTG KSEGKTYRFF EELEAFETLS SYQPEPESQP AKSSAVITNA PATSSLIPWI SSSNPSTEKS SSPLKHHHQV SVQPITTNPT FLAKQPSSTT
201: PFPFYSSNNT TTVSQPPISN DLMNNVSSLN LFSSSTSSST ASDEEEDHHQ VKSSRKKRKY WKGLFTKLTK ELMEKQEKMQ KRFLETLEYR EKERISREEA
301: WRVQEIGRIN REHETLIHER SNAAAKDAAI ISFLHKISGG QPQQPQQHNH KPSQRKQYQS DHSITFESKE PRAVLLDTTI KMGNYDNNHS VSPSSSRWPK
401: TEVEALIRIR KNLEANYQEN GTKGPLWEEI SAGMRRLGYN RSAKRCKEKW ENINKYFKKV KESNKKRPLD SKTCPYFHQL EALYNERNKS GAMPLPLPLM
501: VTPQRQLLLS QETQTEFETD QREKVGDKED EEEGESEEDE YDEEEEGEGD NETSEFEIVL NKTSSPMDIN NNLFT
101: HKRTKEGRTG KSEGKTYRFF EELEAFETLS SYQPEPESQP AKSSAVITNA PATSSLIPWI SSSNPSTEKS SSPLKHHHQV SVQPITTNPT FLAKQPSSTT
201: PFPFYSSNNT TTVSQPPISN DLMNNVSSLN LFSSSTSSST ASDEEEDHHQ VKSSRKKRKY WKGLFTKLTK ELMEKQEKMQ KRFLETLEYR EKERISREEA
301: WRVQEIGRIN REHETLIHER SNAAAKDAAI ISFLHKISGG QPQQPQQHNH KPSQRKQYQS DHSITFESKE PRAVLLDTTI KMGNYDNNHS VSPSSSRWPK
401: TEVEALIRIR KNLEANYQEN GTKGPLWEEI SAGMRRLGYN RSAKRCKEKW ENINKYFKKV KESNKKRPLD SKTCPYFHQL EALYNERNKS GAMPLPLPLM
501: VTPQRQLLLS QETQTEFETD QREKVGDKED EEEGESEEDE YDEEEEGEGD NETSEFEIVL NKTSSPMDIN NNLFT
Arabidopsis Description
GT-2Trihelix transcription factor GT-2 [Source:UniProtKB/Swiss-Prot;Acc:Q39117]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.