Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P04610_001 | Banana | nucleus | 54.67 | 24.17 |
| GSMUA_Achr1P24120_001 | Banana | nucleus | 52.34 | 16.74 |
| Os02t0104500-01 | Rice | nucleus | 28.97 | 12.92 |
| VIT_04s0008g01850.t01 | Wine grape | nucleus | 32.71 | 10.85 |
| HORVU0Hr1G014900.1 | Barley | nucleus | 34.11 | 10.33 |
| TraesCS6B01G020100.1 | Wheat | nucleus | 35.51 | 9.99 |
| GSMUA_Achr8P11760_001 | Banana | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 24.77 | 9.52 |
| TraesCS6D01G016300.1 | Wheat | nucleus | 33.64 | 9.51 |
| TraesCS6A01G013200.2 | Wheat | nucleus | 32.71 | 9.3 |
| Zm00001d014938_P001 | Maize | nucleus | 28.5 | 9.19 |
| GSMUA_Achr1P04100_001 | Banana | nucleus | 27.1 | 9.05 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.44 | 9.03 |
| GSMUA_Achr11P... | Banana | nucleus | 25.7 | 8.61 |
| Zm00001d054080_P001 | Maize | nucleus | 28.5 | 8.54 |
| GSMUA_Achr4P24780_001 | Banana | nucleus | 26.64 | 8.52 |
| EES06104 | Sorghum | nucleus | 29.44 | 8.51 |
| GSMUA_Achr9P18800_001 | Banana | nucleus | 20.56 | 7.63 |
| CDY52482 | Canola | nucleus | 21.5 | 7.59 |
| KRH34074 | Soybean | nucleus | 20.56 | 7.57 |
| Bra009994.1-P | Field mustard | nucleus | 21.03 | 7.38 |
| CDX86194 | Canola | nucleus | 21.03 | 7.38 |
| GSMUA_Achr5P19950_001 | Banana | nucleus, plastid | 22.43 | 7.27 |
| KRG96954 | Soybean | nucleus | 19.63 | 7.0 |
| AT5G28300.1 | Thale cress | nucleus | 20.09 | 6.95 |
| KRH68714 | Soybean | nucleus | 20.09 | 6.9 |
| GSMUA_Achr2P11910_001 | Banana | nucleus | 20.56 | 6.88 |
| CDY52502 | Canola | nucleus | 19.16 | 6.87 |
| GSMUA_Achr4P29130_001 | Banana | nucleus | 22.43 | 6.87 |
| Bra020607.1-P | Field mustard | nucleus | 19.16 | 6.74 |
| KRG92655 | Soybean | nucleus | 21.03 | 6.71 |
| CDY05590 | Canola | nucleus | 18.69 | 6.69 |
| GSMUA_Achr2P00580_001 | Banana | nucleus | 20.09 | 6.13 |
| PGSC0003DMT400080676 | Potato | nucleus | 9.81 | 4.51 |
| GSMUA_Achr8P07630_001 | Banana | nucleus | 4.21 | 2.26 |
| GSMUA_Achr8P11770_001 | Banana | nucleus | 0.93 | 1.17 |
| GSMUA_AchrUn_... | Banana | nucleus | 1.87 | 0.85 |
| Solyc08g061910.2.1 | Tomato | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP04130_001 | EnsemblPlants:GSMUA_AchrUn_randomT04130_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG04130_001 | Gene3D:1.10.10.60 | ncoils:Coil | PANTHER:PTHR21654 |
| PANTHER:PTHR21654:SF31 | PFAM:PF13837 | SEG:seg | UniParc:UPI000295459C | UniProt:M0U675 | MapMan:35.1 |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG04130_001]
Coordinates
chrchrUn_random:+:17867730..17868530
Molecular Weight (calculated)
23706.2 Da
IEP (calculated)
4.304
GRAVY (calculated)
-1.435
Length
214 amino acids
Sequence
(BLAST)
(BLAST)
001: MATMGYHRSA KRCKEKWENI NKYFRKTKER GKKRPQHSKT CPYFHQLDQL YSKSHNHTPN PSTSSPNADV ATANASGGSD DRRKDNSDLL DAIMAPNDGH
101: GFKFSDMATL GFDFSSKGDE SDQATAAKGS LVSHPEHDDG EEEDDDDQGG GGGGGGGGEQ YEEEEEDEEE EEEEEEGGEG QGQGQENLCR PRLPLDQDED
201: ELHDSSVFFQ RLQS
101: GFKFSDMATL GFDFSSKGDE SDQATAAKGS LVSHPEHDDG EEEDDDDQGG GGGGGGGGEQ YEEEEEDEEE EEEEEEGGEG QGQGQENLCR PRLPLDQDED
201: ELHDSSVFFQ RLQS
001: MFDGGVPEQI HRFIASPPPP PPLPPHQPAA ERSLPFPVSF SSFNTNHQPQ HMLSLDSRKI IHHHHHHHHH DIKDGGATTG EWIGQTDHDD SDNHHQHHHH
101: HPWCSDEVLA LLRFRSTVEN WFPEFTWEHT SRKLAEVGFK RSPQECKEKF EEEERRYFNS NNNNNNNTND HQHIGNYNNK GNNYRIFSEV EEFYHHGHDN
201: EHVSSEVGDN QNKRTNLVEG KGNVGETVQD LMAEDKLRDQ DQGQVEEASM ENQRNSIEVG KVGNVEDDAK SSSSSSLMMI MKEKKRKKRK KEKERFGVLK
301: GFCEGLVRNM IAQQEEMHKK LLEDMVKKEE EKIAREEAWK KQEIERVNKE VEIRAQEQAM ASDRNTNIIK FISKFTDHDL DVVQNPTSPS QDSSSLALRK
401: TQGRRKFQTS SSLLPQTLTP HNLLTIDKSL EPFSTKTLKP KNQNPKPPKS DDKSDLGKRW PKDEVLALIN IRRSISNMND DDHKDENSLS TSSKAVPLWE
501: RISKKMLEIG YKRSAKRCKE KWENINKYFR KTKDVNKKRP LDSRTCPYFH QLTALYSQPP TGTTATTATT ATSARDLDTR PEENRVGSQD PDISVPMHVD
601: GDGAGDKSNV QFSGFDLEF
101: HPWCSDEVLA LLRFRSTVEN WFPEFTWEHT SRKLAEVGFK RSPQECKEKF EEEERRYFNS NNNNNNNTND HQHIGNYNNK GNNYRIFSEV EEFYHHGHDN
201: EHVSSEVGDN QNKRTNLVEG KGNVGETVQD LMAEDKLRDQ DQGQVEEASM ENQRNSIEVG KVGNVEDDAK SSSSSSLMMI MKEKKRKKRK KEKERFGVLK
301: GFCEGLVRNM IAQQEEMHKK LLEDMVKKEE EKIAREEAWK KQEIERVNKE VEIRAQEQAM ASDRNTNIIK FISKFTDHDL DVVQNPTSPS QDSSSLALRK
401: TQGRRKFQTS SSLLPQTLTP HNLLTIDKSL EPFSTKTLKP KNQNPKPPKS DDKSDLGKRW PKDEVLALIN IRRSISNMND DDHKDENSLS TSSKAVPLWE
501: RISKKMLEIG YKRSAKRCKE KWENINKYFR KTKDVNKKRP LDSRTCPYFH QLTALYSQPP TGTTATTATT ATSARDLDTR PEENRVGSQD PDISVPMHVD
601: GDGAGDKSNV QFSGFDLEF
Arabidopsis Description
Trihelix transcription factor GTL2 [Source:UniProtKB/Swiss-Prot;Acc:Q8H181]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.