Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY05590 | Canola | nucleus | 94.47 | 94.31 |
| CDY52482 | Canola | nucleus | 79.23 | 78.05 |
| CDX86194 | Canola | nucleus | 79.4 | 77.7 |
| AT5G28300.1 | Thale cress | nucleus | 78.89 | 76.09 |
| KRH34074 | Soybean | nucleus | 38.02 | 39.07 |
| VIT_14s0030g01860.t01 | Wine grape | plastid | 39.53 | 38.37 |
| KRG96954 | Soybean | nucleus | 37.02 | 36.83 |
| KRH68714 | Soybean | nucleus | 37.52 | 35.96 |
| KRG92655 | Soybean | nucleus | 38.86 | 34.58 |
| CDY45957 | Canola | nucleus | 22.11 | 27.05 |
| CDY13568 | Canola | nucleus | 21.78 | 26.37 |
| CDY62151 | Canola | nucleus | 23.45 | 25.69 |
| CDY48546 | Canola | nucleus | 17.76 | 25.24 |
| CDY44964 | Canola | nucleus | 16.08 | 24.94 |
| CDY45955 | Canola | nucleus | 18.26 | 24.77 |
| CDX85981 | Canola | nucleus | 14.91 | 24.38 |
| CDY71745 | Canola | nucleus | 22.95 | 23.95 |
| CDX88320 | Canola | nucleus | 21.78 | 23.9 |
| CDY65284 | Canola | nucleus | 21.78 | 23.47 |
| CDX93785 | Canola | nucleus | 23.12 | 23.43 |
| CDY40550 | Canola | nucleus | 15.24 | 23.27 |
| CDX68080 | Canola | nucleus | 22.45 | 23.14 |
| CDY28914 | Canola | nucleus | 14.91 | 23.0 |
| CDY48545 | Canola | nucleus, plastid | 21.11 | 22.18 |
| Os02t0104500-01 | Rice | nucleus | 17.09 | 21.25 |
| CDY17716 | Canola | nucleus | 12.06 | 20.75 |
| GSMUA_Achr7P04610_001 | Banana | nucleus | 16.75 | 20.66 |
| PGSC0003DMT400080676 | Potato | nucleus | 15.58 | 19.96 |
| CDX85980 | Canola | nucleus | 6.87 | 19.34 |
| GSMUA_AchrUn_... | Banana | nucleus | 6.87 | 19.16 |
| CDX87564 | Canola | nucleus | 13.57 | 18.97 |
| GSMUA_Achr1P24120_001 | Banana | nucleus | 21.11 | 18.83 |
| CDX70293 | Canola | nucleus | 17.92 | 18.74 |
| Zm00001d014938_P001 | Maize | nucleus | 20.6 | 18.52 |
| CDY44379 | Canola | nucleus | 17.25 | 17.49 |
| CDY11266 | Canola | nucleus | 14.74 | 17.25 |
| Solyc08g061910.2.1 | Tomato | nucleus | 7.2 | 17.2 |
| CDY10364 | Canola | nucleus | 14.57 | 17.16 |
| Zm00001d054080_P001 | Maize | nucleus | 20.44 | 17.09 |
| CDX80883 | Canola | nucleus | 14.57 | 17.06 |
| EES06104 | Sorghum | nucleus | 21.11 | 17.03 |
| HORVU0Hr1G014900.1 | Barley | nucleus | 20.1 | 16.97 |
| TraesCS6B01G020100.1 | Wheat | nucleus | 21.61 | 16.95 |
| TraesCS6A01G013200.2 | Wheat | nucleus | 21.27 | 16.87 |
| TraesCS6D01G016300.1 | Wheat | nucleus | 21.27 | 16.78 |
| CDY04893 | Canola | nucleus | 13.57 | 15.98 |
| GSMUA_AchrUn_... | Banana | nucleus | 11.73 | 14.93 |
| CDX77787 | Canola | nucleus | 15.91 | 14.8 |
| GSMUA_AchrUn_... | Banana | nucleus | 14.41 | 12.32 |
| CDX87563 | Canola | nucleus | 0.67 | 5.8 |
| CDY45956 | Canola | cytosol | 0.5 | 4.23 |
Protein Annotations
| EnsemblPlants:CDY52502 | EnsemblPlantsGene:GSBRNA2T00007178001 | Gene3D:1.10.10.60 | InterPro:IPR017877 | InterPro:Myb-like_dom | ncoils:Coil |
| PANTHER:PTHR21654 | PANTHER:PTHR21654:SF22 | PFAM:PF13837 | PFscan:PS50090 | ProteinID:CDY52502 | ProteinID:CDY52502.1 |
| SEG:seg | UniParc:UPI0004EF3531 | UniProt:A0A078IRC5 | MapMan:15.5.20 | : | : |
Description
BnaAnng11490DBnaAnng11490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IRC5]
Coordinates
chrLK033097:-:37266..39563
Molecular Weight (calculated)
68169.6 Da
IEP (calculated)
7.631
GRAVY (calculated)
-1.019
Length
597 amino acids
Sequence
(BLAST)
(BLAST)
001: MFDGGVPEQI DQFIASPQPP PLLPPHQPAT ERSLPFPVSF ASFNSNQQAQ HMLSLDSGKI IHHQHHHGIK DGGVSSEWIG HTDHDGHNHR HFHHPWCSDE
101: VLALLRFRST VENWFPEFTW ELTSRKLAEV GFKRSPQECK EKFEEEERRY FNSNNNTNDH HISNYNNKGN YRMFSEVEEF YHHGHNDDQH VSSEVGDNQN
201: KRNNSLEGKE NVEEMGHNLL EEGKIDHQGQ SQVEESSMGN KINPVDNVRN EDGAKSSSSS SLMMIMRDKK KRKRKKKKER FGVLKGFCEG LVRNMIVQQE
301: EMHRKLLEDM VKKEEEKMAR EEAWKTQEME RLNKEVETRA NEQAMASDRN TSIIKFISKF TGDNHDYGNG TVQSPSPSQD SSSLVLPKTQ GRRKCQTSSS
401: LLPQALTPHY PISLQTNDIP LEPISTETLK TKTQNRKPPI SDEKSDTGKR WPRDEVLALI NIRRSINGIS LSSSSSKAVP LWERISKKML ESGYKRSSKR
501: CKEKWENINK YFKKTKDVNK KRPLDSRTCP YFHQLTALYS QPSTGTTTTA TDTSTAELET RVGSGDPDDF PAVMHVDANG AGEKSNVQFS GFDLALP
101: VLALLRFRST VENWFPEFTW ELTSRKLAEV GFKRSPQECK EKFEEEERRY FNSNNNTNDH HISNYNNKGN YRMFSEVEEF YHHGHNDDQH VSSEVGDNQN
201: KRNNSLEGKE NVEEMGHNLL EEGKIDHQGQ SQVEESSMGN KINPVDNVRN EDGAKSSSSS SLMMIMRDKK KRKRKKKKER FGVLKGFCEG LVRNMIVQQE
301: EMHRKLLEDM VKKEEEKMAR EEAWKTQEME RLNKEVETRA NEQAMASDRN TSIIKFISKF TGDNHDYGNG TVQSPSPSQD SSSLVLPKTQ GRRKCQTSSS
401: LLPQALTPHY PISLQTNDIP LEPISTETLK TKTQNRKPPI SDEKSDTGKR WPRDEVLALI NIRRSINGIS LSSSSSKAVP LWERISKKML ESGYKRSSKR
501: CKEKWENINK YFKKTKDVNK KRPLDSRTCP YFHQLTALYS QPSTGTTTTA TDTSTAELET RVGSGDPDDF PAVMHVDANG AGEKSNVQFS GFDLALP
001: MFDGGVPEQI HRFIASPPPP PPLPPHQPAA ERSLPFPVSF SSFNTNHQPQ HMLSLDSRKI IHHHHHHHHH DIKDGGATTG EWIGQTDHDD SDNHHQHHHH
101: HPWCSDEVLA LLRFRSTVEN WFPEFTWEHT SRKLAEVGFK RSPQECKEKF EEEERRYFNS NNNNNNNTND HQHIGNYNNK GNNYRIFSEV EEFYHHGHDN
201: EHVSSEVGDN QNKRTNLVEG KGNVGETVQD LMAEDKLRDQ DQGQVEEASM ENQRNSIEVG KVGNVEDDAK SSSSSSLMMI MKEKKRKKRK KEKERFGVLK
301: GFCEGLVRNM IAQQEEMHKK LLEDMVKKEE EKIAREEAWK KQEIERVNKE VEIRAQEQAM ASDRNTNIIK FISKFTDHDL DVVQNPTSPS QDSSSLALRK
401: TQGRRKFQTS SSLLPQTLTP HNLLTIDKSL EPFSTKTLKP KNQNPKPPKS DDKSDLGKRW PKDEVLALIN IRRSISNMND DDHKDENSLS TSSKAVPLWE
501: RISKKMLEIG YKRSAKRCKE KWENINKYFR KTKDVNKKRP LDSRTCPYFH QLTALYSQPP TGTTATTATT ATSARDLDTR PEENRVGSQD PDISVPMHVD
601: GDGAGDKSNV QFSGFDLEF
101: HPWCSDEVLA LLRFRSTVEN WFPEFTWEHT SRKLAEVGFK RSPQECKEKF EEEERRYFNS NNNNNNNTND HQHIGNYNNK GNNYRIFSEV EEFYHHGHDN
201: EHVSSEVGDN QNKRTNLVEG KGNVGETVQD LMAEDKLRDQ DQGQVEEASM ENQRNSIEVG KVGNVEDDAK SSSSSSLMMI MKEKKRKKRK KEKERFGVLK
301: GFCEGLVRNM IAQQEEMHKK LLEDMVKKEE EKIAREEAWK KQEIERVNKE VEIRAQEQAM ASDRNTNIIK FISKFTDHDL DVVQNPTSPS QDSSSLALRK
401: TQGRRKFQTS SSLLPQTLTP HNLLTIDKSL EPFSTKTLKP KNQNPKPPKS DDKSDLGKRW PKDEVLALIN IRRSISNMND DDHKDENSLS TSSKAVPLWE
501: RISKKMLEIG YKRSAKRCKE KWENINKYFR KTKDVNKKRP LDSRTCPYFH QLTALYSQPP TGTTATTATT ATSARDLDTR PEENRVGSQD PDISVPMHVD
601: GDGAGDKSNV QFSGFDLEF
Arabidopsis Description
Trihelix transcription factor GTL2 [Source:UniProtKB/Swiss-Prot;Acc:Q8H181]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.