Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G016300.1 | Wheat | nucleus | 95.01 | 95.51 |
| TraesCS6A01G013200.2 | Wheat | nucleus | 93.56 | 94.56 |
| HORVU0Hr1G014900.1 | Barley | nucleus | 83.71 | 90.1 |
| Zm00001d014938_P001 | Maize | nucleus | 64.91 | 74.4 |
| EES06104 | Sorghum | nucleus | 72.27 | 74.32 |
| Zm00001d054080_P001 | Maize | nucleus | 69.25 | 73.81 |
| Os02t0104500-01 | Rice | nucleus | 45.6 | 72.29 |
| GSMUA_Achr7P04610_001 | Banana | nucleus | 31.54 | 49.59 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.57 | 47.97 |
| GSMUA_Achr1P24120_001 | Banana | nucleus | 39.95 | 45.44 |
| VIT_04s0008g01850.t01 | Wine grape | nucleus | 32.85 | 38.76 |
| GSMUA_AchrUn_... | Banana | nucleus | 9.99 | 35.51 |
| PGSC0003DMT400080676 | Potato | nucleus | 15.51 | 25.32 |
| TraesCS6B01G284400.3 | Wheat | nucleus, plastid | 20.11 | 23.54 |
| KRH34074 | Soybean | nucleus | 17.35 | 22.72 |
| TraesCS2B01G407400.1 | Wheat | nucleus | 22.08 | 22.11 |
| KRG96954 | Soybean | nucleus | 17.08 | 21.67 |
| CDY52502 | Canola | nucleus | 16.95 | 21.61 |
| TraesCS1B01G203300.2 | Wheat | nucleus | 23.0 | 21.5 |
| CDY52482 | Canola | nucleus | 17.08 | 21.45 |
| CDX86194 | Canola | nucleus | 17.08 | 21.31 |
| Bra009994.1-P | Field mustard | nucleus | 17.08 | 21.31 |
| CDY05590 | Canola | nucleus | 16.56 | 21.07 |
| Bra020607.1-P | Field mustard | nucleus | 16.82 | 21.05 |
| KRH68714 | Soybean | nucleus | 17.21 | 21.03 |
| AT5G28300.1 | Thale cress | nucleus | 17.08 | 21.0 |
| KRG92655 | Soybean | nucleus | 17.21 | 19.52 |
| TraesCS4B01G396900.1 | Wheat | nucleus | 17.74 | 19.51 |
| Solyc08g061910.2.1 | Tomato | nucleus | 6.31 | 19.2 |
| GSMUA_AchrUn_... | Banana | nucleus | 16.82 | 18.34 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G020100.1 | EnsemblPlantsGene:TraesCS6B01G020100 | Gene3D:1.10.10.60 | InterPro:IPR017877 | InterPro:Myb-like_dom | InterPro:SANT/Myb |
| PANTHER:PTHR21654 | PANTHER:PTHR21654:SF31 | PFAM:PF13837 | PFscan:PS50090 | SEG:seg | SMART:SM00717 |
| TIGR:cd12203 | MapMan:15.5.20 | : | : | : | : |
Description
No Description!
Coordinates
chr6B:-:12115991..12118806
Molecular Weight (calculated)
80378.8 Da
IEP (calculated)
6.326
GRAVY (calculated)
-0.832
Length
761 amino acids
Sequence
(BLAST)
(BLAST)
001: MQSGYGGVSE FQQFIMDGGF AMAAAPQQQA QAAAAAAAAA AAAGGQELGA PFRYQPLHHH AMQHHHQQQQ QQHPPQMPPH FAHFGVAPAA AAAAGGIPFT
101: QQFLNHQAAA AGHHHQQQHH LQLFHHEQQQ QHHKPQQPPA RWTPQQQHHH QHPHQQQQQQ HHHHQLGLDV EAAAVPESTR ATSGGAAPPG VPPFLAAAMN
201: FKLAVDPGGG SGATDDALND GAGGGGGAGS GMMLHGGGGG GGDDEAATES RLRRWTGEEE TSIKEPTWRP LDIDYIHSTS SSSKRKEKVA TPESPAPVAP
301: AANYFKKAGG GDDDNAGAAA SAGVGGGNYK LFSELEAIYK PGSGGGAGQT GSGSGLTGDD NAILPPPSMA DLPGGAAAAA VDAPQANTSE TSAGEDAPAV
401: LQPQPPPPPQ QASVGEARRK RKRRRQEQQQ QLTASASFFE QLVQRLIEHQ EGLHRQFLDA MERRERERAA RDEAWRRQEA DKFAREAAAR AQDRASAAAR
501: ETAIIAYLEK LSGETITLPP PAAANHAPTS ADDATSHDAG GAGRELVPYE YGGELSLPLM SSSSRWPKQE VEALIRVRSG LDNRFQEPGL KGPLWEEVSA
601: RMAAAGYGGR SAKRCKEKWE NINKYFRKAK ESGKKRPAHA KTCPYFDELD RLYSRSSAHA SGASSAAGNN TSTKATANAI TSADDAANKA SSELLDAVVK
701: YPADTHYGPP PGFPNDGGNA DTKDDGEGDA DMGRASGRAG EEHDDEAGQS HGHDDDDEDD H
101: QQFLNHQAAA AGHHHQQQHH LQLFHHEQQQ QHHKPQQPPA RWTPQQQHHH QHPHQQQQQQ HHHHQLGLDV EAAAVPESTR ATSGGAAPPG VPPFLAAAMN
201: FKLAVDPGGG SGATDDALND GAGGGGGAGS GMMLHGGGGG GGDDEAATES RLRRWTGEEE TSIKEPTWRP LDIDYIHSTS SSSKRKEKVA TPESPAPVAP
301: AANYFKKAGG GDDDNAGAAA SAGVGGGNYK LFSELEAIYK PGSGGGAGQT GSGSGLTGDD NAILPPPSMA DLPGGAAAAA VDAPQANTSE TSAGEDAPAV
401: LQPQPPPPPQ QASVGEARRK RKRRRQEQQQ QLTASASFFE QLVQRLIEHQ EGLHRQFLDA MERRERERAA RDEAWRRQEA DKFAREAAAR AQDRASAAAR
501: ETAIIAYLEK LSGETITLPP PAAANHAPTS ADDATSHDAG GAGRELVPYE YGGELSLPLM SSSSRWPKQE VEALIRVRSG LDNRFQEPGL KGPLWEEVSA
601: RMAAAGYGGR SAKRCKEKWE NINKYFRKAK ESGKKRPAHA KTCPYFDELD RLYSRSSAHA SGASSAAGNN TSTKATANAI TSADDAANKA SSELLDAVVK
701: YPADTHYGPP PGFPNDGGNA DTKDDGEGDA DMGRASGRAG EEHDDEAGQS HGHDDDDEDD H
001: MELLAGDCRK RVGDDFEEDI NPFDGSDGGC GWMYGTRQMG SNGNDDALAT LADLASPPQK LKPIRCGVKL PSSSEDRHPL DILAGTLDRL PEMGFGCFEA
101: PLGSKIADVE ESGQLTRGFS KEEDDSLPPL QMEFQARNRI SWDGLSLSSS VDSSDSDSSP DVRKTVTGKR KRETRVKLEH FLEKLVGSMM KRQEKMHNQL
201: INVMEKMEVE RIRREEAWRQ QETERMTQNE EARKQEMARN LSLISFIRSV TGDEIEIPKQ CEFPQPLQQI LPEQCKDEKC ESAQREREIK FRYSSGSGSS
301: GRRWPQEEVQ ALISSRSDVE EKTGINKGAI WDEISARMKE RGYERSAKKC KEKWENMNKY YRRVTEGGQK QPEHSKTRSY FEKLGNFYKT ISSGEREK
101: PLGSKIADVE ESGQLTRGFS KEEDDSLPPL QMEFQARNRI SWDGLSLSSS VDSSDSDSSP DVRKTVTGKR KRETRVKLEH FLEKLVGSMM KRQEKMHNQL
201: INVMEKMEVE RIRREEAWRQ QETERMTQNE EARKQEMARN LSLISFIRSV TGDEIEIPKQ CEFPQPLQQI LPEQCKDEKC ESAQREREIK FRYSSGSGSS
301: GRRWPQEEVQ ALISSRSDVE EKTGINKGAI WDEISARMKE RGYERSAKKC KEKWENMNKY YRRVTEGGQK QPEHSKTRSY FEKLGNFYKT ISSGEREK
Arabidopsis Description
Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FGJ1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.