Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES06104 | Sorghum | nucleus | 91.32 | 88.11 |
| Zm00001d014938_P001 | Maize | nucleus | 81.37 | 87.5 |
| Os02t0104500-01 | Rice | nucleus | 47.9 | 71.25 |
| TraesCS6A01G013200.2 | Wheat | nucleus | 73.25 | 69.46 |
| TraesCS6D01G016300.1 | Wheat | nucleus | 73.53 | 69.35 |
| TraesCS6B01G020100.1 | Wheat | nucleus | 73.81 | 69.25 |
| HORVU0Hr1G014900.1 | Barley | nucleus | 67.37 | 68.03 |
| GSMUA_Achr7P04610_001 | Banana | nucleus | 32.21 | 47.52 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.53 | 46.48 |
| GSMUA_Achr1P24120_001 | Banana | nucleus | 39.92 | 42.6 |
| VIT_04s0008g01850.t01 | Wine grape | nucleus | 33.75 | 37.36 |
| GSMUA_AchrUn_... | Banana | nucleus | 8.54 | 28.5 |
| PGSC0003DMT400080676 | Potato | nucleus | 16.53 | 25.32 |
| KRH34074 | Soybean | nucleus | 18.07 | 22.2 |
| Zm00001d017420_P001 | Maize | nucleus | 20.59 | 21.88 |
| KRG96954 | Soybean | nucleus | 17.93 | 21.33 |
| Zm00001d051316_P002 | Maize | nucleus | 19.89 | 21.26 |
| Zm00001d032453_P001 | Maize | nucleus | 23.25 | 21.17 |
| Zm00001d013849_P001 | Maize | nucleus | 22.55 | 20.72 |
| KRH68714 | Soybean | nucleus | 18.07 | 20.71 |
| CDY52502 | Canola | nucleus | 17.09 | 20.44 |
| CDY52482 | Canola | nucleus | 17.23 | 20.3 |
| Zm00001d002801_P001 | Maize | nucleus | 22.27 | 20.18 |
| CDX86194 | Canola | nucleus | 17.23 | 20.16 |
| Bra009994.1-P | Field mustard | nucleus | 17.23 | 20.16 |
| CDY05590 | Canola | nucleus | 16.81 | 20.07 |
| Bra020607.1-P | Field mustard | nucleus | 16.95 | 19.9 |
| AT5G28300.1 | Thale cress | nucleus | 16.81 | 19.39 |
| KRG92655 | Soybean | nucleus | 17.79 | 18.93 |
| Solyc08g061910.2.1 | Tomato | nucleus | 6.58 | 18.8 |
| Zm00001d027335_P001 | Maize | nucleus | 21.29 | 18.79 |
| Zm00001d025960_P002 | Maize | nucleus | 18.63 | 18.79 |
| GSMUA_AchrUn_... | Banana | nucleus | 18.07 | 18.48 |
Protein Annotations
| EnsemblPlants:Zm00001d054080_P001 | EnsemblPlants:Zm00001d054080_T001 | EnsemblPlantsGene:Zm00001d054080 | Gene3D:1.10.10.60 | InterPro:IPR017877 | InterPro:Myb-like_dom |
| InterPro:SANT/Myb | PANTHER:PTHR21654 | PANTHER:PTHR21654:SF31 | PFAM:PF13837 | PFscan:PS50090 | ProteinID:AQK61233.1 |
| SEG:seg | SMART:SM00717 | UniParc:UPI000221855F | UniProt:K7UTA0 | MapMan:15.5.20 | : |
Description
Trihelix-transcription factor 21Trihelix transcription factor GTL2
Coordinates
chr4:+:246034945..246038140
Molecular Weight (calculated)
76273.6 Da
IEP (calculated)
6.368
GRAVY (calculated)
-0.862
Length
714 amino acids
Sequence
(BLAST)
(BLAST)
001: MQSGYGGVSE FQQFIMDGGF AMSAPPPPQQ QQPQTATAQE LGGPFRYQPL HHHALPPQHH HHAPHMPPHF AHFGAAPPPP FTQQLLHQAA AAGHHHLQLF
101: HEQQQQQHPH HHKPQPPHHH HQQPPARWAP QPQHQQQQQQ PPQAQTHHHH HHHHLGFDVE AAVPESSGAA GAGRAAASGV AAPPGVPPFL AAAMNFKLAV
201: DAGGGSGATG GTDDALNDGG GGVGSGMMLH VGGGGGNDDD EAATESRLRR WTGDEETSIK EPTWRPLDID YLHSSSSSKR TGKEKVATPE SPAPPAAAAN
301: YFKKGDDNAA AAVAAGGGNY KLFSELEAIY KPGSGGAGGA QTGSGSGLTG DDNAILEPAM PDLPGITAED AGPQLITSET SAGEEAAAVV QPQPSADAAR
401: RKRKRRRQQE QLSASASFFE RLVQRLMEHQ ESLHRQFLEA MERRERDRAA RDEAWRRQEA DKFAREAAAR AQDRASAAAR EAAIIAYLEK ISGESITLPP
501: PASGDEDAAA AGKELVPYEG GDAAAAPEGG GSLHLSSSRW PKHEVEALIR VRTGLEGRFQ EPGLKGPLWE EVSARMAAAG YGRSAKRCKE KWENINKYFR
601: KAKESGKKRP AHAKTCPYFD ELDRLYSRLG QAKQASSELL DAVVKYPDVR YGPPGFGMDR EQASGGGGNN NNTNNEGGQD GGAEDFDGEE DGIGKGRAGD
701: GQDDEVESHG HEDE
101: HEQQQQQHPH HHKPQPPHHH HQQPPARWAP QPQHQQQQQQ PPQAQTHHHH HHHHLGFDVE AAVPESSGAA GAGRAAASGV AAPPGVPPFL AAAMNFKLAV
201: DAGGGSGATG GTDDALNDGG GGVGSGMMLH VGGGGGNDDD EAATESRLRR WTGDEETSIK EPTWRPLDID YLHSSSSSKR TGKEKVATPE SPAPPAAAAN
301: YFKKGDDNAA AAVAAGGGNY KLFSELEAIY KPGSGGAGGA QTGSGSGLTG DDNAILEPAM PDLPGITAED AGPQLITSET SAGEEAAAVV QPQPSADAAR
401: RKRKRRRQQE QLSASASFFE RLVQRLMEHQ ESLHRQFLEA MERRERDRAA RDEAWRRQEA DKFAREAAAR AQDRASAAAR EAAIIAYLEK ISGESITLPP
501: PASGDEDAAA AGKELVPYEG GDAAAAPEGG GSLHLSSSRW PKHEVEALIR VRTGLEGRFQ EPGLKGPLWE EVSARMAAAG YGRSAKRCKE KWENINKYFR
601: KAKESGKKRP AHAKTCPYFD ELDRLYSRLG QAKQASSELL DAVVKYPDVR YGPPGFGMDR EQASGGGGNN NNTNNEGGQD GGAEDFDGEE DGIGKGRAGD
701: GQDDEVESHG HEDE
001: MELLAGDCRK RVGDDFEEDI NPFDGSDGGC GWMYGTRQMG SNGNDDALAT LADLASPPQK LKPIRCGVKL PSSSEDRHPL DILAGTLDRL PEMGFGCFEA
101: PLGSKIADVE ESGQLTRGFS KEEDDSLPPL QMEFQARNRI SWDGLSLSSS VDSSDSDSSP DVRKTVTGKR KRETRVKLEH FLEKLVGSMM KRQEKMHNQL
201: INVMEKMEVE RIRREEAWRQ QETERMTQNE EARKQEMARN LSLISFIRSV TGDEIEIPKQ CEFPQPLQQI LPEQCKDEKC ESAQREREIK FRYSSGSGSS
301: GRRWPQEEVQ ALISSRSDVE EKTGINKGAI WDEISARMKE RGYERSAKKC KEKWENMNKY YRRVTEGGQK QPEHSKTRSY FEKLGNFYKT ISSGEREK
101: PLGSKIADVE ESGQLTRGFS KEEDDSLPPL QMEFQARNRI SWDGLSLSSS VDSSDSDSSP DVRKTVTGKR KRETRVKLEH FLEKLVGSMM KRQEKMHNQL
201: INVMEKMEVE RIRREEAWRQ QETERMTQNE EARKQEMARN LSLISFIRSV TGDEIEIPKQ CEFPQPLQQI LPEQCKDEKC ESAQREREIK FRYSSGSGSS
301: GRRWPQEEVQ ALISSRSDVE EKTGINKGAI WDEISARMKE RGYERSAKKC KEKWENMNKY YRRVTEGGQK QPEHSKTRSY FEKLGNFYKT ISSGEREK
Arabidopsis Description
Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FGJ1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.