Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400080676 | Potato | nucleus | 70.4 | 37.77 |
| GSMUA_AchrUn_... | Banana | nucleus | 18.4 | 9.81 |
| Solyc09g009250.2.1 | Tomato | nucleus | 16.8 | 7.73 |
| Solyc11g005380.1.1 | Tomato | nucleus | 15.2 | 7.68 |
| VIT_04s0008g01850.t01 | Wine grape | nucleus | 19.6 | 7.6 |
| Zm00001d014938_P001 | Maize | nucleus | 19.2 | 7.23 |
| CDY52502 | Canola | nucleus | 17.2 | 7.2 |
| Bra020607.1-P | Field mustard | nucleus | 17.2 | 7.07 |
| Solyc12g056510.1.1 | Tomato | nucleus | 18.4 | 7.07 |
| KRH34074 | Soybean | nucleus | 16.0 | 6.88 |
| CDY05590 | Canola | nucleus | 16.4 | 6.86 |
| GSMUA_Achr7P04610_001 | Banana | nucleus | 13.2 | 6.82 |
| GSMUA_Achr1P24120_001 | Banana | nucleus | 18.0 | 6.73 |
| Os02t0104500-01 | Rice | nucleus | 12.8 | 6.67 |
| Zm00001d054080_P001 | Maize | nucleus | 18.8 | 6.58 |
| TraesCS6A01G013200.2 | Wheat | nucleus | 19.6 | 6.51 |
| EES06104 | Sorghum | nucleus | 19.2 | 6.49 |
| CDY52482 | Canola | nucleus | 15.6 | 6.44 |
| Solyc04g071360.2.1 | Tomato | nucleus | 16.8 | 6.42 |
| Bra009994.1-P | Field mustard | nucleus | 15.6 | 6.39 |
| CDX86194 | Canola | nucleus | 15.6 | 6.39 |
| TraesCS6D01G016300.1 | Wheat | nucleus | 19.2 | 6.34 |
| TraesCS6B01G020100.1 | Wheat | nucleus | 19.2 | 6.31 |
| AT5G28300.1 | Thale cress | nucleus | 15.6 | 6.3 |
| Solyc11g012720.1.1 | Tomato | nucleus | 10.0 | 6.19 |
| HORVU0Hr1G014900.1 | Barley | nucleus | 17.2 | 6.08 |
| KRG92655 | Soybean | nucleus | 16.0 | 5.96 |
| KRG96954 | Soybean | nucleus | 14.0 | 5.83 |
| KRH68714 | Soybean | nucleus | 14.0 | 5.62 |
| GSMUA_AchrUn_... | Banana | nucleus | 2.8 | 1.0 |
| GSMUA_AchrUn_... | Banana | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Solyc08g061910.2.1 | EnsemblPlantsGene:Solyc08g061910.2 | ncoils:Coil | SEG:seg | UniParc:UPI000276AEBF | UniProt:K4CKY0 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr8:+:49875482..49877611
Molecular Weight (calculated)
28979.9 Da
IEP (calculated)
5.224
GRAVY (calculated)
-0.870
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MMQSDYEMGG IHQECEDEPR FMVENNASTS SPFYPNYHFP PTSHPILQQI HSLPITQHFF PYQHAHYRSM SEEIRVDQSQ TAELVAFPAS EIRGGQEDAL
101: IRGSERYCTQ PRQTCVAVWQ NQEDSAMKQP VWKGEYSNGN AIEKNKQEED EELYSLEETN KRRVVFGELE AICIRGIASE SADNLPTNHN VTFPELALNE
201: AMVNKMDNTM GKFHKRKRGK DEWGRFFKSL VKKLANHQED LQRSLMETME
101: IRGSERYCTQ PRQTCVAVWQ NQEDSAMKQP VWKGEYSNGN AIEKNKQEED EELYSLEETN KRRVVFGELE AICIRGIASE SADNLPTNHN VTFPELALNE
201: AMVNKMDNTM GKFHKRKRGK DEWGRFFKSL VKKLANHQED LQRSLMETME
001: MQTHLLVGPI PLKGYRRFSS SSFSGDLLPP SSNPIGRDLF PHRRRHRDGK SRSYRNRSKT TITSAAFSSS SNTGGQNHYA VLGIARNATQ GDIKRAYRLL
101: ARKFHPDVNK DSKAGELFKS VRCSYEVLSN EATRTQYDRA LKLQENSRFH RVKRHSYTPE VEDAMKYYYT WSEKRQRSRH GRFYGHYSTY PNSHFYAETE
201: PQEEEGVETA PDQRDSFVEA LKSAFLSMFL LYTFGCLASL TFSTFTALLD KELDMGYKVG FMIAWILGGK GGILLTLCLT FASWLCGKAS SSVVVLVLVA
301: MWVGSNLARH APLPQGALLT LLYMSIKLQV DST
101: ARKFHPDVNK DSKAGELFKS VRCSYEVLSN EATRTQYDRA LKLQENSRFH RVKRHSYTPE VEDAMKYYYT WSEKRQRSRH GRFYGHYSTY PNSHFYAETE
201: PQEEEGVETA PDQRDSFVEA LKSAFLSMFL LYTFGCLASL TFSTFTALLD KELDMGYKVG FMIAWILGGK GGILLTLCLT FASWLCGKAS SSVVVLVLVA
301: MWVGSNLARH APLPQGALLT LLYMSIKLQV DST
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FK56]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.