Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g061910.2.1 | Tomato | nucleus | 37.77 | 70.4 |
| VIT_04s0008g01850.t01 | Wine grape | nucleus | 30.26 | 21.86 |
| Os02t0104500-01 | Rice | nucleus | 21.89 | 21.25 |
| GSMUA_Achr7P04610_001 | Banana | nucleus | 21.46 | 20.66 |
| PGSC0003DMT400034607 | Potato | nucleus | 16.31 | 19.54 |
| PGSC0003DMT400010112 | Potato | nucleus | 20.39 | 18.89 |
| Zm00001d014938_P001 | Maize | nucleus | 25.97 | 18.22 |
| GSMUA_Achr1P24120_001 | Banana | nucleus | 25.97 | 18.09 |
| PGSC0003DMT400072404 | Potato | nucleus | 16.09 | 18.07 |
| GSMUA_AchrUn_... | Banana | nucleus | 17.6 | 17.48 |
| PGSC0003DMT400007016 | Potato | nucleus | 19.74 | 16.97 |
| Zm00001d054080_P001 | Maize | nucleus | 25.32 | 16.53 |
| CDY52482 | Canola | nucleus | 21.24 | 16.34 |
| Bra009994.1-P | Field mustard | nucleus | 21.24 | 16.23 |
| CDX86194 | Canola | nucleus | 21.24 | 16.23 |
| EES06104 | Sorghum | nucleus | 25.75 | 16.22 |
| KRH34074 | Soybean | nucleus | 19.96 | 16.01 |
| PGSC0003DMT400061942 | Potato | nucleus | 21.46 | 15.92 |
| TraesCS6A01G013200.2 | Wheat | nucleus | 25.54 | 15.8 |
| CDY05590 | Canola | nucleus | 20.17 | 15.72 |
| HORVU0Hr1G014900.1 | Barley | nucleus | 23.82 | 15.7 |
| Bra020607.1-P | Field mustard | nucleus | 20.39 | 15.62 |
| CDY52502 | Canola | nucleus | 19.96 | 15.58 |
| TraesCS6B01G020100.1 | Wheat | nucleus | 25.32 | 15.51 |
| KRG96954 | Soybean | nucleus | 19.96 | 15.5 |
| TraesCS6D01G016300.1 | Wheat | nucleus | 25.11 | 15.46 |
| AT5G28300.1 | Thale cress | nucleus | 20.39 | 15.35 |
| KRH68714 | Soybean | nucleus | 19.31 | 14.45 |
| KRG92655 | Soybean | nucleus | 19.96 | 13.86 |
| GSMUA_AchrUn_... | Banana | nucleus | 17.17 | 11.46 |
| GSMUA_AchrUn_... | Banana | nucleus | 4.51 | 9.81 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400080676 | EnsemblPlantsGene:PGSC0003DMG400031419 | Gene3D:1.10.10.60 | InterPro:IPR017877 | InterPro:Myb-like_dom | PANTHER:PTHR21654 |
| PANTHER:PTHR21654:SF31 | PFAM:PF13837 | PFscan:PS50090 | PGSC:PGSC0003DMG400031419 | UniParc:UPI000295F678 | UniProt:M1D3T6 |
| MapMan:15.5.20 | : | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400031419]
Coordinates
chr8:+:33973044..33974911
Molecular Weight (calculated)
54440.7 Da
IEP (calculated)
6.522
GRAVY (calculated)
-1.008
Length
466 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGRNQQSAD VEEQHRLMVE NNASTSSPFY TINPNYHFPQ PHPLLQQINN LPITQQFFQY QHPHYRSMSM LEQQQEEIRL DHSQTAELVQ GSFFPVSEIR
101: GGQEDALIRG SERYCTQPRQ TCLAVWQNQE DSAIIKQPFW KPLSAEFSNG NATERNKQDE DQEMYRSEEI HHQQHIIKSL EEENKPRVLF GELEAIYGDD
201: IHRIASESVL TRNHNVSFPE LAVNDSNQAM AVEIDNNIGS ESASVGGREV EAVHKRKRAR ESMSRFFKSL VKKLGKQQED LQRSFMETIE RLDQERKERE
301: QVWRERELAK LQKEEAARAH ERSLASSRES ALVSCLEKLT GQKINFQSFK IKEEQNHSSL VNNNMKRWPQ PEVEALIQIR TNLESKFATT PKGLLWEEVS
401: NSMSLMGFQR NARRCKEKWE NMHKSSSLKR RKEITREQLN TTTVDFVNQR IHDKDENGSK KEDMEE
101: GGQEDALIRG SERYCTQPRQ TCLAVWQNQE DSAIIKQPFW KPLSAEFSNG NATERNKQDE DQEMYRSEEI HHQQHIIKSL EEENKPRVLF GELEAIYGDD
201: IHRIASESVL TRNHNVSFPE LAVNDSNQAM AVEIDNNIGS ESASVGGREV EAVHKRKRAR ESMSRFFKSL VKKLGKQQED LQRSFMETIE RLDQERKERE
301: QVWRERELAK LQKEEAARAH ERSLASSRES ALVSCLEKLT GQKINFQSFK IKEEQNHSSL VNNNMKRWPQ PEVEALIQIR TNLESKFATT PKGLLWEEVS
401: NSMSLMGFQR NARRCKEKWE NMHKSSSLKR RKEITREQLN TTTVDFVNQR IHDKDENGSK KEDMEE
001: MSGNSEGLLE SSGGGVGGSV EEEKDMKMEE TGEGAGSGGN RWPRPETLAL LRIRSEMDKA FRDSTLKAPL WEEISRKMME LGYKRSSKKC KEKFENVYKY
101: HKRTKEGRTG KSEGKTYRFF EELEAFETLS SYQPEPESQP AKSSAVITNA PATSSLIPWI SSSNPSTEKS SSPLKHHHQV SVQPITTNPT FLAKQPSSTT
201: PFPFYSSNNT TTVSQPPISN DLMNNVSSLN LFSSSTSSST ASDEEEDHHQ VKSSRKKRKY WKGLFTKLTK ELMEKQEKMQ KRFLETLEYR EKERISREEA
301: WRVQEIGRIN REHETLIHER SNAAAKDAAI ISFLHKISGG QPQQPQQHNH KPSQRKQYQS DHSITFESKE PRAVLLDTTI KMGNYDNNHS VSPSSSRWPK
401: TEVEALIRIR KNLEANYQEN GTKGPLWEEI SAGMRRLGYN RSAKRCKEKW ENINKYFKKV KESNKKRPLD SKTCPYFHQL EALYNERNKS GAMPLPLPLM
501: VTPQRQLLLS QETQTEFETD QREKVGDKED EEEGESEEDE YDEEEEGEGD NETSEFEIVL NKTSSPMDIN NNLFT
101: HKRTKEGRTG KSEGKTYRFF EELEAFETLS SYQPEPESQP AKSSAVITNA PATSSLIPWI SSSNPSTEKS SSPLKHHHQV SVQPITTNPT FLAKQPSSTT
201: PFPFYSSNNT TTVSQPPISN DLMNNVSSLN LFSSSTSSST ASDEEEDHHQ VKSSRKKRKY WKGLFTKLTK ELMEKQEKMQ KRFLETLEYR EKERISREEA
301: WRVQEIGRIN REHETLIHER SNAAAKDAAI ISFLHKISGG QPQQPQQHNH KPSQRKQYQS DHSITFESKE PRAVLLDTTI KMGNYDNNHS VSPSSSRWPK
401: TEVEALIRIR KNLEANYQEN GTKGPLWEEI SAGMRRLGYN RSAKRCKEKW ENINKYFKKV KESNKKRPLD SKTCPYFHQL EALYNERNKS GAMPLPLPLM
501: VTPQRQLLLS QETQTEFETD QREKVGDKED EEEGESEEDE YDEEEEGEGD NETSEFEIVL NKTSSPMDIN NNLFT
Arabidopsis Description
GT-2Trihelix transcription factor GT-2 [Source:UniProtKB/Swiss-Prot;Acc:Q39117]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.