Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G013200.2 | Wheat | nucleus | 89.82 | 84.33 |
| TraesCS6D01G016300.1 | Wheat | nucleus | 89.82 | 83.88 |
| TraesCS6B01G020100.1 | Wheat | nucleus | 90.1 | 83.71 |
| Os02t0104500-01 | Rice | nucleus | 49.22 | 72.5 |
| Zm00001d014938_P001 | Maize | nucleus | 64.5 | 68.67 |
| Zm00001d054080_P001 | Maize | nucleus | 68.03 | 67.37 |
| EES06104 | Sorghum | nucleus | 70.16 | 67.03 |
| GSMUA_Achr7P04610_001 | Banana | nucleus | 32.53 | 47.52 |
| GSMUA_AchrUn_... | Banana | nucleus | 27.72 | 41.79 |
| GSMUA_Achr1P24120_001 | Banana | nucleus | 39.04 | 41.26 |
| VIT_04s0008g01850.t01 | Wine grape | nucleus | 33.52 | 36.74 |
| GSMUA_AchrUn_... | Banana | nucleus | 10.33 | 34.11 |
| HORVU6Hr1G025090.1 | Barley | cytosol, nucleus, plastid | 8.06 | 31.49 |
| HORVU6Hr1G061300.6 | Barley | nucleus | 21.36 | 23.85 |
| PGSC0003DMT400080676 | Potato | nucleus | 15.7 | 23.82 |
| HORVU6Hr1G025060.1 | Barley | nucleus | 3.96 | 22.05 |
| HORVU2Hr1G092650.3 | Barley | nucleus | 22.49 | 21.43 |
| KRH34074 | Soybean | nucleus | 17.54 | 21.34 |
| KRG96954 | Soybean | nucleus | 17.68 | 20.83 |
| KRH68714 | Soybean | nucleus | 18.1 | 20.55 |
| CDY52502 | Canola | nucleus | 16.97 | 20.1 |
| CDY52482 | Canola | nucleus | 17.11 | 19.97 |
| AT5G28300.1 | Thale cress | nucleus | 17.4 | 19.87 |
| CDX86194 | Canola | nucleus | 17.11 | 19.84 |
| Bra009994.1-P | Field mustard | nucleus | 17.11 | 19.84 |
| HORVU4Hr1G089120.1 | Barley | nucleus, plastid | 22.07 | 19.67 |
| Bra020607.1-P | Field mustard | nucleus | 16.83 | 19.57 |
| HORVU1Hr1G046940.4 | Barley | nucleus | 22.91 | 19.57 |
| CDY05590 | Canola | nucleus | 16.55 | 19.57 |
| KRG92655 | Soybean | nucleus | 17.54 | 18.48 |
| GSMUA_AchrUn_... | Banana | nucleus | 18.1 | 18.34 |
| Solyc08g061910.2.1 | Tomato | nucleus | 6.08 | 17.2 |
Protein Annotations
| EnsemblPlants:HORVU0Hr1G014900.1 | EnsemblPlantsGene:HORVU0Hr1G014900 | Gene3D:1.10.10.60 | InterPro:IPR017877 | InterPro:Myb-like_dom | InterPro:SANT/Myb |
| PANTHER:PTHR21654 | PANTHER:PTHR21654:SF31 | PFAM:PF13837 | PFscan:PS50090 | SEG:seg | SMART:SM00717 |
| UniParc:UPI000B48888F | UniProt:A0A287E1R3 | MapMan:15.5.20 | : | : | : |
Description
No Description!
Coordinates
chrchrUn:+:82563227..82567089
Molecular Weight (calculated)
74743.1 Da
IEP (calculated)
6.469
GRAVY (calculated)
-0.878
Length
707 amino acids
Sequence
(BLAST)
(BLAST)
001: MQHHHHHQQQ QQHQPQMPPH FAHFGGAPAA AAAGGIPFTQ QFLNHQAAAA GHHHQQQHHH LQLFHHEQHQ QQHHKPQPPA RWAPQQHHPQ HQQHHHHQLG
101: LDVEAAAVPE SSRATSGGAA PPGVPPFLAA AMNFKLAVDP GGGSGATDDA LNDGTGGGGG AGSGMMLHGG GGADDEAATE SRLRRWTGEE ETSIKEPTWR
201: PLDIDYIHST SSSSKRAAAG KEKVATPESP APVAPAANYF KKASGADDNA GAAASAGGGG GGGNYKLFSE LEAIYKPGSG GGAGQTGSGS GLTGDDNAIL
301: PPPSMADLPG AAAAAVDAPQ ANTSETSAGE DAPAVLQPQQ PPPPQQASLG EARRKRKRRR QEQQQQLTAS ASFFEQLVQR LIEHQEGLHR QFLDAMERRE
401: RERAARDEAW RRQEADKFAR EAAARAQDRA SAAARETAII AYLEKLSGET ITLPAPANPA PTSADDATSH DAGRELVPYE YGGDPSLPLM SSSSRWPKHE
501: VEALIRGRSG LDNRFQEPGL KGPMWEEVSV RMAAAGYGGR SAKRCKEKWE NINKYFRKAK ESGKKRPAHA KTCPYFDELD RLYSRSSGAG AAASSSAAGN
601: ANANTSTKAN ANANAMTTSA DDAANNSNKA SSELLDAVVK YPTDAHYGAP PGFLSDGANA DVKDDGAAHR DGDGDVDMGR TSGRAGDEHE DEAAQSHGHD
701: GDDDDDH
101: LDVEAAAVPE SSRATSGGAA PPGVPPFLAA AMNFKLAVDP GGGSGATDDA LNDGTGGGGG AGSGMMLHGG GGADDEAATE SRLRRWTGEE ETSIKEPTWR
201: PLDIDYIHST SSSSKRAAAG KEKVATPESP APVAPAANYF KKASGADDNA GAAASAGGGG GGGNYKLFSE LEAIYKPGSG GGAGQTGSGS GLTGDDNAIL
301: PPPSMADLPG AAAAAVDAPQ ANTSETSAGE DAPAVLQPQQ PPPPQQASLG EARRKRKRRR QEQQQQLTAS ASFFEQLVQR LIEHQEGLHR QFLDAMERRE
401: RERAARDEAW RRQEADKFAR EAAARAQDRA SAAARETAII AYLEKLSGET ITLPAPANPA PTSADDATSH DAGRELVPYE YGGDPSLPLM SSSSRWPKHE
501: VEALIRGRSG LDNRFQEPGL KGPMWEEVSV RMAAAGYGGR SAKRCKEKWE NINKYFRKAK ESGKKRPAHA KTCPYFDELD RLYSRSSGAG AAASSSAAGN
601: ANANTSTKAN ANANAMTTSA DDAANNSNKA SSELLDAVVK YPTDAHYGAP PGFLSDGANA DVKDDGAAHR DGDGDVDMGR TSGRAGDEHE DEAAQSHGHD
701: GDDDDDH
001: MELLAGDCRK RVGDDFEEDI NPFDGSDGGC GWMYGTRQMG SNGNDDALAT LADLASPPQK LKPIRCGVKL PSSSEDRHPL DILAGTLDRL PEMGFGCFEA
101: PLGSKIADVE ESGQLTRGFS KEEDDSLPPL QMEFQARNRI SWDGLSLSSS VDSSDSDSSP DVRKTVTGKR KRETRVKLEH FLEKLVGSMM KRQEKMHNQL
201: INVMEKMEVE RIRREEAWRQ QETERMTQNE EARKQEMARN LSLISFIRSV TGDEIEIPKQ CEFPQPLQQI LPEQCKDEKC ESAQREREIK FRYSSGSGSS
301: GRRWPQEEVQ ALISSRSDVE EKTGINKGAI WDEISARMKE RGYERSAKKC KEKWENMNKY YRRVTEGGQK QPEHSKTRSY FEKLGNFYKT ISSGEREK
101: PLGSKIADVE ESGQLTRGFS KEEDDSLPPL QMEFQARNRI SWDGLSLSSS VDSSDSDSSP DVRKTVTGKR KRETRVKLEH FLEKLVGSMM KRQEKMHNQL
201: INVMEKMEVE RIRREEAWRQ QETERMTQNE EARKQEMARN LSLISFIRSV TGDEIEIPKQ CEFPQPLQQI LPEQCKDEKC ESAQREREIK FRYSSGSGSS
301: GRRWPQEEVQ ALISSRSDVE EKTGINKGAI WDEISARMKE RGYERSAKKC KEKWENMNKY YRRVTEGGQK QPEHSKTRSY FEKLGNFYKT ISSGEREK
Arabidopsis Description
Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FGJ1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.