Factsheet for HORVU6Hr1G025090.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

plastid 2
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85981	Canola	nucleus	35.36	17.53
Os04t0541100-01	Rice	nucleus	47.51	14.21
CDY44964	Canola	nucleus	29.83	14.03
TraesCS2D01G387100.1	Wheat	nucleus	55.25	13.42
TraesCS2A01G389200.1	Wheat	nucleus	55.25	13.37
HORVU2Hr1G092650.3	Barley	nucleus	53.04	12.94
TraesCS2B01G407400.1	Wheat	nucleus	54.14	12.89
OQU82045	Sorghum	nucleus, plastid	52.49	12.72
CDY62151	Canola	nucleus	35.91	11.93
Zm00001d002801_P001	Maize	nucleus	50.83	11.68
CDY71745	Canola	nucleus	36.46	11.54
HORVU6Hr1G061300.6	Barley	nucleus	40.33	11.53
CDX93785	Canola	nucleus	36.46	11.21
Bra040010.1-P	Field mustard	nucleus	36.46	10.61
Bra036731.1-P	Field mustard	nucleus	36.46	10.48
AT1G33240.1	Thale cress	nucleus	38.12	10.31
HORVU6Hr1G025060.1	Barley	nucleus	7.18	10.24
HORVU1Hr1G046940.4	Barley	nucleus	43.09	9.42
Zm00001d025960_P002	Maize	nucleus	36.46	9.32
HORVU4Hr1G089120.1	Barley	nucleus, plastid	38.67	8.83
HORVU0Hr1G014900.1	Barley	nucleus	31.49	8.06
CDX85980	Canola	nucleus	0.55	0.47

Protein Annotations

EnsemblPlants:HORVU6Hr1G025090.1	EnsemblPlantsGene:HORVU6Hr1G025090	PANTHER:PTHR21654	PANTHER:PTHR21654:SF24	SEG:seg	UniParc:UPI000B48412F
UniProt:A0A287TM64	MapMan:15.5.20	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:89561861..89562406

Molecular Weight (calculated)

19638.4 Da

IEP (calculated)

8.521

GRAVY (calculated)

-0.692

Length

181 amino acids

Sequence
(BLAST)

001: PQPPPPGPIQ PAPISWAAPA AAVELPQQQP PVSLQGLSFP SMPDCESDDG ASEGDEMAAA GSGDGLGNRK RKRGGGGSKK KMEAFVEGLM KQVVQSQQEM
101: QQRFLATMEK REAERAARDE AWRRQEVARL KREQEQRAHE RAAAATRDAS IIAFLQRVGG QAAQVVPPFV IPMPTPMQFQ T

Best Arabidopsis Sequence Match ( AT1G76880.1 )
(BLAST)

001: MMQLGGGTPT TTAAATTVTT ATAPPPQSNN NDSAATEAAA AAVGAFEVSE EMHDRGFGGN RWPRQETLAL LKIRSDMGIA FRDASVKGPL WEEVSRKMAE
101: HGYIRNAKKC KEKFENVYKY HKRTKEGRTG KSEGKTYRFF DQLEALESQS TTSLHHHQQQ TPLRPQQNNN NNNNNNNNSS IFSTPPPVTT VMPTLPSSSI
201: PPYTQQINVP SFPNISGDFL SDNSTSSSSS YSTSSDMEMG GGTATTRKKR KRKWKVFFER LMKQVVDKQE ELQRKFLEAV EKREHERLVR EESWRVQEIA
301: RINREHEILA QERSMSAAKD AAVMAFLQKL SEKQPNQPQP QPQPQQVRPS MQLNNNNQQQ PPQRSPPPQP PAPLPQPIQA VVSTLDTTKT DNGGDQNMTP
401: AASASSSRWP KVEIEALIKL RTNLDSKYQE NGPKGPLWEE ISAGMRRLGF NRNSKRCKEK WENINKYFKK VKESNKKRPE DSKTCPYFHQ LDALYRERNK
501: FHSNNNIAAS SSSSGLVKPD NSVPLMVQPE QQWPPAVTTA TTTPAAAQPD QQSQPSEQNF DDEEGTDEEY DDEDEEEENE EEEGGEFELV PSNNNNNKTT
601: NNL

Arabidopsis Description

Duplicated homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C6K3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.