Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d014938_P001 | Maize | nucleus | 70.21 | 50.75 |
| EES06104 | Sorghum | nucleus | 76.04 | 49.32 |
| HORVU0Hr1G014900.1 | Barley | nucleus | 72.5 | 49.22 |
| Zm00001d054080_P001 | Maize | nucleus | 71.25 | 47.9 |
| TraesCS6A01G013200.2 | Wheat | nucleus | 72.29 | 46.08 |
| TraesCS6B01G020100.1 | Wheat | nucleus | 72.29 | 45.6 |
| TraesCS6D01G016300.1 | Wheat | nucleus | 71.88 | 45.57 |
| GSMUA_Achr7P04610_001 | Banana | nucleus | 40.42 | 40.08 |
| GSMUA_Achr1P24120_001 | Banana | nucleus | 42.71 | 30.64 |
| VIT_04s0008g01850.t01 | Wine grape | nucleus | 39.17 | 29.15 |
| GSMUA_AchrUn_... | Banana | nucleus | 12.92 | 28.97 |
| GSMUA_AchrUn_... | Banana | nucleus | 25.83 | 26.44 |
| Os02t0648300-01 | Rice | nucleus | 23.54 | 25.62 |
| Os04t0541100-01 | Rice | nucleus | 29.17 | 23.14 |
| PGSC0003DMT400080676 | Potato | nucleus | 21.25 | 21.89 |
| GSMUA_AchrUn_... | Banana | nucleus | 26.67 | 18.34 |
| KRG96954 | Soybean | nucleus | 22.92 | 18.33 |
| KRH34074 | Soybean | nucleus | 22.08 | 18.24 |
| KRH68714 | Soybean | nucleus | 23.33 | 17.98 |
| Bra020607.1-P | Field mustard | nucleus | 21.67 | 17.11 |
| CDY52502 | Canola | nucleus | 21.25 | 17.09 |
| CDY05590 | Canola | nucleus | 21.25 | 17.06 |
| Bra009994.1-P | Field mustard | nucleus | 21.67 | 17.05 |
| CDX86194 | Canola | nucleus | 21.67 | 17.05 |
| CDY52482 | Canola | nucleus | 21.46 | 17.0 |
| AT5G28300.1 | Thale cress | nucleus | 21.25 | 16.48 |
| KRG92655 | Soybean | nucleus | 22.29 | 15.95 |
| Solyc08g061910.2.1 | Tomato | nucleus | 6.67 | 12.8 |
| Os10t0516500-01 | Rice | cytosol, nucleus | 5.42 | 10.66 |
Protein Annotations
| EnsemblPlants:Os02t0104500-01 | EnsemblPlantsGene:Os02g0104500 | Gene3D:1.10.10.60 | InterPro:IPR017877 | InterPro:Myb-like_dom | PANTHER:PTHR21654 |
| PANTHER:PTHR21654:SF31 | PFAM:PF13837 | PFscan:PS50090 | ProteinID:BAS76548.1 | SEG:seg | UniParc:UPI000393C092 |
| UniProt:A0A0P0VDM9 | MapMan:15.5.20 | : | : | : | : |
Description
MYB-like domain containing protein. (Os02t0104500-01)
Coordinates
chr2:-:219736..221602
Molecular Weight (calculated)
51906.5 Da
IEP (calculated)
5.085
GRAVY (calculated)
-0.897
Length
480 amino acids
Sequence
(BLAST)
(BLAST)
001: LAVERAVADI DFVLLDLLCR RPLDIDYIHS SSSSKRAPPK DKPATPDSPA PPPPAYYFKN KPDDNAAAAS AASAGAVNYK LFSELEAIYK PGSGGPQTGS
101: GSGLTGDDNA MLAPPMADLP DAAAANPPHL NTSETSAGED AHAVVQPQPQ TQQPSGADAA RRKRKRRRQE QLSASASFFE RLVQRLMEHQ ESLHRQFLDT
201: MERRERERAA RDEAWRRQEA DKFAREAAAR AQDRASAAAR ESAIIAYLEK ISGETITLPP PAANPAPGAD EQDGVGKEVV AYDGEGSLQL SSSRWPKHEV
301: EALIRVRTGL EDRFQEPGLK GPLWEEVSAR MAAAGYRRNA KRCKEKWENI NKYFRKAKES GKKRPAHAKT CPYFDELDRL YSRSGSGGGG GSSSAGGNGG
401: EEAKGSSELL DAVVKYPDVR CAPPGFPFDG EQNEEGRTKD DGDEAHHDGD GDGDEEDVGV GVGRATDDHD DQVDESHDGH
101: GSGLTGDDNA MLAPPMADLP DAAAANPPHL NTSETSAGED AHAVVQPQPQ TQQPSGADAA RRKRKRRRQE QLSASASFFE RLVQRLMEHQ ESLHRQFLDT
201: MERRERERAA RDEAWRRQEA DKFAREAAAR AQDRASAAAR ESAIIAYLEK ISGETITLPP PAANPAPGAD EQDGVGKEVV AYDGEGSLQL SSSRWPKHEV
301: EALIRVRTGL EDRFQEPGLK GPLWEEVSAR MAAAGYRRNA KRCKEKWENI NKYFRKAKES GKKRPAHAKT CPYFDELDRL YSRSGSGGGG GSSSAGGNGG
401: EEAKGSSELL DAVVKYPDVR CAPPGFPFDG EQNEEGRTKD DGDEAHHDGD GDGDEEDVGV GVGRATDDHD DQVDESHDGH
001: MSGNSEGLLE SSGGGVGGSV EEEKDMKMEE TGEGAGSGGN RWPRPETLAL LRIRSEMDKA FRDSTLKAPL WEEISRKMME LGYKRSSKKC KEKFENVYKY
101: HKRTKEGRTG KSEGKTYRFF EELEAFETLS SYQPEPESQP AKSSAVITNA PATSSLIPWI SSSNPSTEKS SSPLKHHHQV SVQPITTNPT FLAKQPSSTT
201: PFPFYSSNNT TTVSQPPISN DLMNNVSSLN LFSSSTSSST ASDEEEDHHQ VKSSRKKRKY WKGLFTKLTK ELMEKQEKMQ KRFLETLEYR EKERISREEA
301: WRVQEIGRIN REHETLIHER SNAAAKDAAI ISFLHKISGG QPQQPQQHNH KPSQRKQYQS DHSITFESKE PRAVLLDTTI KMGNYDNNHS VSPSSSRWPK
401: TEVEALIRIR KNLEANYQEN GTKGPLWEEI SAGMRRLGYN RSAKRCKEKW ENINKYFKKV KESNKKRPLD SKTCPYFHQL EALYNERNKS GAMPLPLPLM
501: VTPQRQLLLS QETQTEFETD QREKVGDKED EEEGESEEDE YDEEEEGEGD NETSEFEIVL NKTSSPMDIN NNLFT
101: HKRTKEGRTG KSEGKTYRFF EELEAFETLS SYQPEPESQP AKSSAVITNA PATSSLIPWI SSSNPSTEKS SSPLKHHHQV SVQPITTNPT FLAKQPSSTT
201: PFPFYSSNNT TTVSQPPISN DLMNNVSSLN LFSSSTSSST ASDEEEDHHQ VKSSRKKRKY WKGLFTKLTK ELMEKQEKMQ KRFLETLEYR EKERISREEA
301: WRVQEIGRIN REHETLIHER SNAAAKDAAI ISFLHKISGG QPQQPQQHNH KPSQRKQYQS DHSITFESKE PRAVLLDTTI KMGNYDNNHS VSPSSSRWPK
401: TEVEALIRIR KNLEANYQEN GTKGPLWEEI SAGMRRLGYN RSAKRCKEKW ENINKYFKKV KESNKKRPLD SKTCPYFHQL EALYNERNKS GAMPLPLPLM
501: VTPQRQLLLS QETQTEFETD QREKVGDKED EEEGESEEDE YDEEEEGEGD NETSEFEIVL NKTSSPMDIN NNLFT
Arabidopsis Description
GT-2Trihelix transcription factor GT-2 [Source:UniProtKB/Swiss-Prot;Acc:Q39117]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.