Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX85980 | Canola | nucleus | 21.72 | 25.0 |
| Os02t0648300-01 | Rice | nucleus | 24.59 | 13.61 |
| Os04t0541100-01 | Rice | nucleus | 31.56 | 12.73 |
| CDY44964 | Canola | nucleus | 19.67 | 12.47 |
| CDX93785 | Canola | nucleus | 22.13 | 9.17 |
| Bra040010.1-P | Field mustard | nucleus | 22.13 | 8.68 |
| CDY71745 | Canola | nucleus | 20.08 | 8.57 |
| CDY62151 | Canola | nucleus | 18.85 | 8.44 |
| AT1G33240.1 | Thale cress | nucleus | 21.72 | 7.92 |
| Bra036731.1-P | Field mustard | nucleus | 20.08 | 7.78 |
| Os02t0104500-01 | Rice | nucleus | 10.66 | 5.42 |
| CDX85981 | Canola | nucleus | 1.23 | 0.82 |
Protein Annotations
| EnsemblPlants:Os10t0516500-01 | EnsemblPlantsGene:Os10g0516500 | PANTHER:PTHR21654 | PANTHER:PTHR21654:SF48 | ProteinID:BAF26978.1 | ProteinID:BAT11664.1 |
| SEG:seg | UniParc:UPI0000DD9A40 | UniProt:Q0IWD7 | MapMan:35.2 | : | : |
Description
Conserved hypothetical protein. (Os10t0516500-01)
Coordinates
chr10:-:19929324..19930875
Molecular Weight (calculated)
25088.2 Da
IEP (calculated)
4.380
GRAVY (calculated)
-0.892
Length
244 amino acids
Sequence
(BLAST)
(BLAST)
001: KRPEDSKTCP YFHQLDALYR NKAALNSSSS SAAAAAPALP PPEHAEPAVT VAAPISQTPP PPPPQPVTTT KNGNGTSSTN GANGEGGGGG SGGMQMQASN
101: GSVVAGNKFF TGAAAKKPED IMKEMMEQRP QQPAAANNAF NRTDGGGGGG GVDSDNMDED DEDDYDDDDD DDDDDVDGNK MQYEIQFQHQ HHHQQPPQHR
201: HQQSVVRPNA AASAAAGGNP PGTAAPATAA AATTTTGSFL AMVQ
101: GSVVAGNKFF TGAAAKKPED IMKEMMEQRP QQPAAANNAF NRTDGGGGGG GVDSDNMDED DEDDYDDDDD DDDDDVDGNK MQYEIQFQHQ HHHQQPPQHR
201: HQQSVVRPNA AASAAAGGNP PGTAAPATAA AATTTTGSFL AMVQ
001: MMQLGGGTPT TTAAATTVTT ATAPPPQSNN NDSAATEAAA AAVGAFEVSE EMHDRGFGGN RWPRQETLAL LKIRSDMGIA FRDASVKGPL WEEVSRKMAE
101: HGYIRNAKKC KEKFENVYKY HKRTKEGRTG KSEGKTYRFF DQLEALESQS TTSLHHHQQQ TPLRPQQNNN NNNNNNNNSS IFSTPPPVTT VMPTLPSSSI
201: PPYTQQINVP SFPNISGDFL SDNSTSSSSS YSTSSDMEMG GGTATTRKKR KRKWKVFFER LMKQVVDKQE ELQRKFLEAV EKREHERLVR EESWRVQEIA
301: RINREHEILA QERSMSAAKD AAVMAFLQKL SEKQPNQPQP QPQPQQVRPS MQLNNNNQQQ PPQRSPPPQP PAPLPQPIQA VVSTLDTTKT DNGGDQNMTP
401: AASASSSRWP KVEIEALIKL RTNLDSKYQE NGPKGPLWEE ISAGMRRLGF NRNSKRCKEK WENINKYFKK VKESNKKRPE DSKTCPYFHQ LDALYRERNK
501: FHSNNNIAAS SSSSGLVKPD NSVPLMVQPE QQWPPAVTTA TTTPAAAQPD QQSQPSEQNF DDEEGTDEEY DDEDEEEENE EEEGGEFELV PSNNNNNKTT
601: NNL
101: HGYIRNAKKC KEKFENVYKY HKRTKEGRTG KSEGKTYRFF DQLEALESQS TTSLHHHQQQ TPLRPQQNNN NNNNNNNNSS IFSTPPPVTT VMPTLPSSSI
201: PPYTQQINVP SFPNISGDFL SDNSTSSSSS YSTSSDMEMG GGTATTRKKR KRKWKVFFER LMKQVVDKQE ELQRKFLEAV EKREHERLVR EESWRVQEIA
301: RINREHEILA QERSMSAAKD AAVMAFLQKL SEKQPNQPQP QPQPQQVRPS MQLNNNNQQQ PPQRSPPPQP PAPLPQPIQA VVSTLDTTKT DNGGDQNMTP
401: AASASSSRWP KVEIEALIKL RTNLDSKYQE NGPKGPLWEE ISAGMRRLGF NRNSKRCKEK WENINKYFKK VKESNKKRPE DSKTCPYFHQ LDALYRERNK
501: FHSNNNIAAS SSSSGLVKPD NSVPLMVQPE QQWPPAVTTA TTTPAAAQPD QQSQPSEQNF DDEEGTDEEY DDEDEEEENE EEEGGEFELV PSNNNNNKTT
601: NNL
Arabidopsis Description
Duplicated homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C6K3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.