Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 5
- nucleus 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G222500.1 | Wheat | nucleus | 90.77 | 87.93 |
| TraesCS6A01G240200.1 | Wheat | nucleus | 89.23 | 86.96 |
| HORVU6Hr1G061300.6 | Barley | nucleus | 84.31 | 86.57 |
| Os02t0648300-01 | Rice | nucleus | 38.31 | 56.46 |
| Zm00001d017420_P001 | Maize | nucleus | 54.46 | 52.68 |
| Zm00001d051316_P002 | Maize | nucleus | 52.62 | 51.2 |
| EES05815 | Sorghum | nucleus | 56.31 | 50.83 |
| CDY62151 | Canola | nucleus | 32.77 | 39.08 |
| TraesCS2B01G407400.1 | Wheat | nucleus | 45.69 | 39.08 |
| CDX85981 | Canola | nucleus | 21.23 | 37.81 |
| CDY71745 | Canola | nucleus | 33.23 | 37.76 |
| CDX93785 | Canola | nucleus | 33.54 | 37.01 |
| Bra040010.1-P | Field mustard | nucleus | 33.85 | 35.37 |
| CDY44964 | Canola | nucleus | 20.77 | 35.06 |
| Bra036731.1-P | Field mustard | nucleus | 33.85 | 34.92 |
| AT1G33240.1 | Thale cress | nucleus | 34.31 | 33.33 |
| CDX85980 | Canola | nucleus | 10.62 | 32.55 |
| TraesCS4B01G396900.1 | Wheat | nucleus | 34.62 | 32.51 |
| TraesCS1B01G203300.2 | Wheat | nucleus | 39.85 | 31.82 |
| TraesCS6B01G020100.1 | Wheat | nucleus | 23.54 | 20.11 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G284400.3 | EnsemblPlantsGene:TraesCS6B01G284400 | Gene3D:1.10.10.60 | InterPro:IPR017877 | InterPro:Myb-like_dom | InterPro:SANT/Myb |
| ncoils:Coil | PANTHER:PTHR21654 | PANTHER:PTHR21654:SF21 | PFAM:PF13837 | PFscan:PS50090 | SEG:seg |
| SMART:SM00717 | TIGR:cd12203 | MapMan:15.5.20 | : | : | : |
Description
No Description!
Coordinates
chr6B:+:512871795..512874422
Molecular Weight (calculated)
70159.2 Da
IEP (calculated)
5.386
GRAVY (calculated)
-0.741
Length
650 amino acids
Sequence
(BLAST)
(BLAST)
001: MTPLLPQPAS AAVSVSSIPS PSPPPMQPQP AGTNLDQLPA AGPGSGSGAV NFHHDDDNML VDAGSGRSGG DAGAGGSGSR WPREETVALI RIRSEMDAAF
101: RNAALKAPIW EEVSRKLAEL GYRRSAKKCK EKFENVDKYY RRTKEGRAGR QDGKNYRFFA ELEALHAAAP QQNLPMATAA TILPDPRPLA MAPAYPGAGL
201: PDLSLSSNSE SESDDESDEE EDQAGGGGGR SNEGMMALFE GMIKQITEKQ DATQRLFLET LEKWEADRTA REEAWRRQEL ARISREREQH ARERAAAAAR
301: DAALIAFLQR VGGNSVLPTP MPAHTAPHPD APAASLQLVV AASEEGGRRG GGESGAGMSR WPKEEVHALI QLRMEKDEHC QDMGAKGPLW EDISAGMRRI
401: GYNRSSKRCK EKWENINKYF KKVKESNKRR PEDSKTCPYF HQLDAIYRKK QFAVNNAGGG CSSTASGNAV GAVNASASEQ HNPWRELEGK ISNDFDRRHS
501: VGGGSSDAPP GDGEVAAAST VLDAIATNKV MTRTFESLHA RAFHTWKSNA RNLIGIFVAQ KSEDNVMAME SNIQSQQTEV TATDETDSDD IEGNYSDDGD
601: DDGDEDDKMK YTIEFQKHKE GGSGSAPAPA TAATVVTSSA PTGSTFLAVQ
101: RNAALKAPIW EEVSRKLAEL GYRRSAKKCK EKFENVDKYY RRTKEGRAGR QDGKNYRFFA ELEALHAAAP QQNLPMATAA TILPDPRPLA MAPAYPGAGL
201: PDLSLSSNSE SESDDESDEE EDQAGGGGGR SNEGMMALFE GMIKQITEKQ DATQRLFLET LEKWEADRTA REEAWRRQEL ARISREREQH ARERAAAAAR
301: DAALIAFLQR VGGNSVLPTP MPAHTAPHPD APAASLQLVV AASEEGGRRG GGESGAGMSR WPKEEVHALI QLRMEKDEHC QDMGAKGPLW EDISAGMRRI
401: GYNRSSKRCK EKWENINKYF KKVKESNKRR PEDSKTCPYF HQLDAIYRKK QFAVNNAGGG CSSTASGNAV GAVNASASEQ HNPWRELEGK ISNDFDRRHS
501: VGGGSSDAPP GDGEVAAAST VLDAIATNKV MTRTFESLHA RAFHTWKSNA RNLIGIFVAQ KSEDNVMAME SNIQSQQTEV TATDETDSDD IEGNYSDDGD
601: DDGDEDDKMK YTIEFQKHKE GGSGSAPAPA TAATVVTSSA PTGSTFLAVQ
001: MMQLGGGTPT TTAAATTVTT ATAPPPQSNN NDSAATEAAA AAVGAFEVSE EMHDRGFGGN RWPRQETLAL LKIRSDMGIA FRDASVKGPL WEEVSRKMAE
101: HGYIRNAKKC KEKFENVYKY HKRTKEGRTG KSEGKTYRFF DQLEALESQS TTSLHHHQQQ TPLRPQQNNN NNNNNNNNSS IFSTPPPVTT VMPTLPSSSI
201: PPYTQQINVP SFPNISGDFL SDNSTSSSSS YSTSSDMEMG GGTATTRKKR KRKWKVFFER LMKQVVDKQE ELQRKFLEAV EKREHERLVR EESWRVQEIA
301: RINREHEILA QERSMSAAKD AAVMAFLQKL SEKQPNQPQP QPQPQQVRPS MQLNNNNQQQ PPQRSPPPQP PAPLPQPIQA VVSTLDTTKT DNGGDQNMTP
401: AASASSSRWP KVEIEALIKL RTNLDSKYQE NGPKGPLWEE ISAGMRRLGF NRNSKRCKEK WENINKYFKK VKESNKKRPE DSKTCPYFHQ LDALYRERNK
501: FHSNNNIAAS SSSSGLVKPD NSVPLMVQPE QQWPPAVTTA TTTPAAAQPD QQSQPSEQNF DDEEGTDEEY DDEDEEEENE EEEGGEFELV PSNNNNNKTT
601: NNL
101: HGYIRNAKKC KEKFENVYKY HKRTKEGRTG KSEGKTYRFF DQLEALESQS TTSLHHHQQQ TPLRPQQNNN NNNNNNNNSS IFSTPPPVTT VMPTLPSSSI
201: PPYTQQINVP SFPNISGDFL SDNSTSSSSS YSTSSDMEMG GGTATTRKKR KRKWKVFFER LMKQVVDKQE ELQRKFLEAV EKREHERLVR EESWRVQEIA
301: RINREHEILA QERSMSAAKD AAVMAFLQKL SEKQPNQPQP QPQPQQVRPS MQLNNNNQQQ PPQRSPPPQP PAPLPQPIQA VVSTLDTTKT DNGGDQNMTP
401: AASASSSRWP KVEIEALIKL RTNLDSKYQE NGPKGPLWEE ISAGMRRLGF NRNSKRCKEK WENINKYFKK VKESNKKRPE DSKTCPYFHQ LDALYRERNK
501: FHSNNNIAAS SSSSGLVKPD NSVPLMVQPE QQWPPAVTTA TTTPAAAQPD QQSQPSEQNF DDEEGTDEEY DDEDEEEENE EEEGGEFELV PSNNNNNKTT
601: NNL
Arabidopsis Description
Duplicated homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C6K3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.