Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P04100_001 | Banana | nucleus | 48.21 | 52.57 |
| GSMUA_Achr8P11760_001 | Banana | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 41.34 | 51.89 |
| GSMUA_Achr11P... | Banana | nucleus | 47.35 | 51.8 |
| GSMUA_Achr2P11910_001 | Banana | nucleus | 46.78 | 51.09 |
| GSMUA_Achr9P18800_001 | Banana | nucleus | 42.06 | 50.95 |
| GSMUA_Achr4P24780_001 | Banana | nucleus | 47.5 | 49.63 |
| GSMUA_Achr5P19950_001 | Banana | nucleus, plastid | 41.2 | 43.64 |
| Zm00001d032453_P001 | Maize | nucleus | 47.21 | 42.09 |
| Zm00001d013849_P001 | Maize | nucleus | 45.92 | 41.31 |
| GSMUA_Achr2P00580_001 | Banana | nucleus | 41.2 | 41.08 |
| EER91374 | Sorghum | nucleus | 46.92 | 40.64 |
| TraesCS1A01G176700.2 | Wheat | nucleus | 45.78 | 39.17 |
| TraesCS1D01G162400.1 | Wheat | nucleus, plastid | 45.64 | 39.05 |
| TraesCS1B01G203300.2 | Wheat | nucleus | 45.35 | 38.94 |
| HORVU1Hr1G046940.4 | Barley | nucleus | 45.64 | 38.53 |
| KXG40355 | Sorghum | nucleus, plastid | 42.63 | 38.16 |
| TraesCSU01G029700.1 | Wheat | nucleus | 40.63 | 36.09 |
| HORVU4Hr1G089120.1 | Barley | nucleus, plastid | 40.92 | 36.07 |
| GSMUA_Achr8P11770_001 | Banana | nucleus | 8.73 | 35.67 |
| TraesCS5A01G558200.1 | Wheat | nucleus, plastid | 40.06 | 35.67 |
| Zm00001d027335_P001 | Maize | nucleus | 40.63 | 35.11 |
| TraesCS4B01G396900.1 | Wheat | nucleus | 34.33 | 34.68 |
| GSMUA_Achr8P07630_001 | Banana | nucleus | 17.17 | 30.15 |
| GSMUA_Achr7P04610_001 | Banana | nucleus | 17.17 | 24.79 |
| GSMUA_AchrUn_... | Banana | nucleus | 6.87 | 22.43 |
| GSMUA_Achr1P24120_001 | Banana | nucleus | 20.89 | 21.82 |
| GSMUA_AchrUn_... | Banana | nucleus | 17.02 | 17.05 |
| GSMUA_AchrUn_... | Banana | nucleus | 11.02 | 16.42 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P29130_001 | EnsemblPlants:GSMUA_Achr4T29130_001 | EnsemblPlantsGene:GSMUA_Achr4G29130_001 | Gene3D:1.10.10.60 | InterPro:IPR017877 | InterPro:Myb-like_dom |
| InterPro:SANT/Myb | PANTHER:PTHR21654 | PANTHER:PTHR21654:SF13 | PFAM:PF13837 | PFscan:PS50090 | SEG:seg |
| SMART:SM00717 | UniParc:UPI0002966B7C | UniProt:M0ST25 | MapMan:15.5.20 | : | : |
Description
AT-GTL1, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G29130_001]
Coordinates
chr4:+:27223440..27233241
Molecular Weight (calculated)
77875.3 Da
IEP (calculated)
9.644
GRAVY (calculated)
-0.932
Length
699 amino acids
Sequence
(BLAST)
(BLAST)
001: MRGSFSLMYH ELQQVNYTGR ETNTILVAEK EKAKKDMQLQ RGGAQYGVPL PEIPGREAEA ASPISGRPPA GAPLANFDKV GPAAAGNSPD DEVLATGEEA
101: ERGGGGVTGN RWPLQETLTL LKIRSEMDAA FRDATLKAPL WEEVSRERER EREREIFSFP LSSSRDSQVT IWRQVRTTDS LLQQWLQQLS YFSGERNEKL
201: AELGYKRTAK KCKEKFENVN KYYKRTKEGR AGRQDGKGYR FFSQLEALRS GSSAAVTPAA PVPSTLVATS SAFSASLLTP PGGAQRISSS AAVAVSAAAA
301: GIGFSSNSSS SEWFESDDEE TDGESQEGRK RKSNGGGSGP SRKMMPFFHR LMKQVMERQE AMQQRFLDAM EKREQDRMIR DEAWRRQEMT RLNREQELLE
401: QEWAMASSRD TAIISYLQKL TGRTIPMPTM SAIPLSISPF PQQQSHTPPP QPAAPQLPSE PMSSSSRWPK AEVHALIKLR SELESKYQET GPKGPLWEEI
501: SAGMQRLGYK RSAKRCKEKW ENINKYFKKV KESNKKRPED SKTCSYFHQL DALYRNKLLG TGNTMGSPAS NQRQSDTPRN MSQQQAPPPP PPPPQPAAEP
601: ESKNATRTQT TNGSLHMIFS DQGLEKVSTV INDYDKLDQT DSDNMNQDDD DDEGKLHYKI QFQRKSMSAG GGGNPSTAAS ATARGEQEKP VQRGRLNTK
101: ERGGGGVTGN RWPLQETLTL LKIRSEMDAA FRDATLKAPL WEEVSRERER EREREIFSFP LSSSRDSQVT IWRQVRTTDS LLQQWLQQLS YFSGERNEKL
201: AELGYKRTAK KCKEKFENVN KYYKRTKEGR AGRQDGKGYR FFSQLEALRS GSSAAVTPAA PVPSTLVATS SAFSASLLTP PGGAQRISSS AAVAVSAAAA
301: GIGFSSNSSS SEWFESDDEE TDGESQEGRK RKSNGGGSGP SRKMMPFFHR LMKQVMERQE AMQQRFLDAM EKREQDRMIR DEAWRRQEMT RLNREQELLE
401: QEWAMASSRD TAIISYLQKL TGRTIPMPTM SAIPLSISPF PQQQSHTPPP QPAAPQLPSE PMSSSSRWPK AEVHALIKLR SELESKYQET GPKGPLWEEI
501: SAGMQRLGYK RSAKRCKEKW ENINKYFKKV KESNKKRPED SKTCSYFHQL DALYRNKLLG TGNTMGSPAS NQRQSDTPRN MSQQQAPPPP PPPPQPAAEP
601: ESKNATRTQT TNGSLHMIFS DQGLEKVSTV INDYDKLDQT DSDNMNQDDD DDEGKLHYKI QFQRKSMSAG GGGNPSTAAS ATARGEQEKP VQRGRLNTK
001: MMQLGGGTPT TTAAATTVTT ATAPPPQSNN NDSAATEAAA AAVGAFEVSE EMHDRGFGGN RWPRQETLAL LKIRSDMGIA FRDASVKGPL WEEVSRKMAE
101: HGYIRNAKKC KEKFENVYKY HKRTKEGRTG KSEGKTYRFF DQLEALESQS TTSLHHHQQQ TPLRPQQNNN NNNNNNNNSS IFSTPPPVTT VMPTLPSSSI
201: PPYTQQINVP SFPNISGDFL SDNSTSSSSS YSTSSDMEMG GGTATTRKKR KRKWKVFFER LMKQVVDKQE ELQRKFLEAV EKREHERLVR EESWRVQEIA
301: RINREHEILA QERSMSAAKD AAVMAFLQKL SEKQPNQPQP QPQPQQVRPS MQLNNNNQQQ PPQRSPPPQP PAPLPQPIQA VVSTLDTTKT DNGGDQNMTP
401: AASASSSRWP KVEIEALIKL RTNLDSKYQE NGPKGPLWEE ISAGMRRLGF NRNSKRCKEK WENINKYFKK VKESNKKRPE DSKTCPYFHQ LDALYRERNK
501: FHSNNNIAAS SSSSGLVKPD NSVPLMVQPE QQWPPAVTTA TTTPAAAQPD QQSQPSEQNF DDEEGTDEEY DDEDEEEENE EEEGGEFELV PSNNNNNKTT
601: NNL
101: HGYIRNAKKC KEKFENVYKY HKRTKEGRTG KSEGKTYRFF DQLEALESQS TTSLHHHQQQ TPLRPQQNNN NNNNNNNNSS IFSTPPPVTT VMPTLPSSSI
201: PPYTQQINVP SFPNISGDFL SDNSTSSSSS YSTSSDMEMG GGTATTRKKR KRKWKVFFER LMKQVVDKQE ELQRKFLEAV EKREHERLVR EESWRVQEIA
301: RINREHEILA QERSMSAAKD AAVMAFLQKL SEKQPNQPQP QPQPQQVRPS MQLNNNNQQQ PPQRSPPPQP PAPLPQPIQA VVSTLDTTKT DNGGDQNMTP
401: AASASSSRWP KVEIEALIKL RTNLDSKYQE NGPKGPLWEE ISAGMRRLGF NRNSKRCKEK WENINKYFKK VKESNKKRPE DSKTCPYFHQ LDALYRERNK
501: FHSNNNIAAS SSSSGLVKPD NSVPLMVQPE QQWPPAVTTA TTTPAAAQPD QQSQPSEQNF DDEEGTDEEY DDEDEEEENE EEEGGEFELV PSNNNNNKTT
601: NNL
Arabidopsis Description
Duplicated homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C6K3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.