Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P04100_001 | Banana | nucleus | 61.58 | 64.27 |
| GSMUA_Achr9P18800_001 | Banana | nucleus | 51.72 | 59.97 |
| GSMUA_Achr2P11910_001 | Banana | nucleus | 55.16 | 57.66 |
| GSMUA_Achr8P11760_001 | Banana | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 45.74 | 54.94 |
| GSMUA_Achr11P... | Banana | nucleus | 51.12 | 53.52 |
| GSMUA_Achr5P19950_001 | Banana | nucleus, plastid | 50.07 | 50.76 |
| GSMUA_Achr4P29130_001 | Banana | nucleus | 49.63 | 47.5 |
| Zm00001d032453_P001 | Maize | nucleus | 49.63 | 42.35 |
| GSMUA_Achr2P00580_001 | Banana | nucleus | 43.65 | 41.65 |
| EER91374 | Sorghum | nucleus | 49.78 | 41.26 |
| Zm00001d013849_P001 | Maize | nucleus | 47.68 | 41.06 |
| TraesCS1A01G176700.2 | Wheat | nucleus | 49.78 | 40.76 |
| TraesCS1B01G203300.2 | Wheat | nucleus | 49.18 | 40.42 |
| TraesCS1D01G162400.1 | Wheat | nucleus, plastid | 49.33 | 40.39 |
| GSMUA_Achr8P11770_001 | Banana | nucleus | 10.31 | 40.35 |
| HORVU1Hr1G046940.4 | Barley | nucleus | 49.93 | 40.34 |
| KXG40355 | Sorghum | nucleus, plastid | 46.64 | 39.95 |
| TraesCSU01G029700.1 | Wheat | nucleus | 45.89 | 39.01 |
| TraesCS5A01G558200.1 | Wheat | nucleus, plastid | 45.14 | 38.47 |
| HORVU4Hr1G089120.1 | Barley | nucleus, plastid | 45.59 | 38.46 |
| TraesCS4B01G396900.1 | Wheat | nucleus | 39.31 | 38.01 |
| Zm00001d027335_P001 | Maize | nucleus | 45.14 | 37.33 |
| GSMUA_Achr8P07630_001 | Banana | nucleus | 16.74 | 28.14 |
| GSMUA_AchrUn_... | Banana | nucleus | 8.52 | 26.64 |
| GSMUA_Achr7P04610_001 | Banana | nucleus | 18.68 | 25.83 |
| GSMUA_Achr1P24120_001 | Banana | nucleus | 22.42 | 22.42 |
| GSMUA_AchrUn_... | Banana | nucleus | 18.68 | 17.91 |
| GSMUA_AchrUn_... | Banana | nucleus | 10.76 | 15.35 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P24780_001 | EnsemblPlants:GSMUA_Achr4T24780_001 | EnsemblPlantsGene:GSMUA_Achr4G24780_001 | Gene3D:1.10.10.60 | InterPro:IPR017877 | InterPro:Myb-like_dom |
| InterPro:SANT/Myb | PANTHER:PTHR21654 | PANTHER:PTHR21654:SF13 | PFAM:PF13837 | PFscan:PS50090 | SEG:seg |
| SMART:SM00717 | UniParc:UPI0002965D59 | UniProt:M0SRT9 | MapMan:15.5.20 | : | : |
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G24780_001]
Coordinates
chr4:-:24457680..24461512
Molecular Weight (calculated)
74006.6 Da
IEP (calculated)
9.148
GRAVY (calculated)
-0.893
Length
669 amino acids
Sequence
(BLAST)
(BLAST)
001: MQQQKAGSQF VVPHSEMAPF SPSAVGSGAH LLGIPGPDPL QQSPMTEAAS PISSRTPARP PTVDFDELAP AVAGNCPDDQ ALAGDEDAER GGGATGNRWP
101: RQETLALLKI RSEMDAAFRD ATFKGSLWEE VCRYSKPSQF PLLSSASTTR IFRSAASIPT NPYFRWRPWF QIPRCKKHAV PPSSLRLLFT IIIIILGKLG
201: ELGYKRSAKK CKEKFENVHK YYKRTKEGRA GRQDGKSYRF FSQLEALYSG SSDGGATTST AKPAPAPPLR KHGGGSGASR KMMAFFDRLM NQVMERQDAM
301: QQRFLEAIEK RDQDRMIRDE AWRRQEMERL NREQELLAQE RVMAASRDTA IISYLQKISG QTTPRAPAQS PQNQNECKQH HKSSEPMPSS SRWPKAEVHA
401: LISLRSGLES KYQEAGPKGT LWEEISAGMQ RLGYNRSAKR CKEKWENINK YFKKVKESNK KRPEDSKTCP YFHQLDAIYR KKLLSSGGTS SGSGNIVGIQ
501: RQQVQEANPP PNQQKSDAVT IMPQEQAPPP PQEQAGSKNG KDGSSNNQNG GNSEGGEVSL GIQVPTSNGG LPSRFFGEGL NKSENFVKEL MGQRQQQAAM
601: DDDYAKLDEA DSDNMDQNDD NDDNDDDDEE DRKMQYTIQF QKQNVNNAGG SGGNGSAAAS PGSFLAIVQ
101: RQETLALLKI RSEMDAAFRD ATFKGSLWEE VCRYSKPSQF PLLSSASTTR IFRSAASIPT NPYFRWRPWF QIPRCKKHAV PPSSLRLLFT IIIIILGKLG
201: ELGYKRSAKK CKEKFENVHK YYKRTKEGRA GRQDGKSYRF FSQLEALYSG SSDGGATTST AKPAPAPPLR KHGGGSGASR KMMAFFDRLM NQVMERQDAM
301: QQRFLEAIEK RDQDRMIRDE AWRRQEMERL NREQELLAQE RVMAASRDTA IISYLQKISG QTTPRAPAQS PQNQNECKQH HKSSEPMPSS SRWPKAEVHA
401: LISLRSGLES KYQEAGPKGT LWEEISAGMQ RLGYNRSAKR CKEKWENINK YFKKVKESNK KRPEDSKTCP YFHQLDAIYR KKLLSSGGTS SGSGNIVGIQ
501: RQQVQEANPP PNQQKSDAVT IMPQEQAPPP PQEQAGSKNG KDGSSNNQNG GNSEGGEVSL GIQVPTSNGG LPSRFFGEGL NKSENFVKEL MGQRQQQAAM
601: DDDYAKLDEA DSDNMDQNDD NDDNDDDDEE DRKMQYTIQF QKQNVNNAGG SGGNGSAAAS PGSFLAIVQ
001: MSGNSEGLLE SSGGGVGGSV EEEKDMKMEE TGEGAGSGGN RWPRPETLAL LRIRSEMDKA FRDSTLKAPL WEEISRKMME LGYKRSSKKC KEKFENVYKY
101: HKRTKEGRTG KSEGKTYRFF EELEAFETLS SYQPEPESQP AKSSAVITNA PATSSLIPWI SSSNPSTEKS SSPLKHHHQV SVQPITTNPT FLAKQPSSTT
201: PFPFYSSNNT TTVSQPPISN DLMNNVSSLN LFSSSTSSST ASDEEEDHHQ VKSSRKKRKY WKGLFTKLTK ELMEKQEKMQ KRFLETLEYR EKERISREEA
301: WRVQEIGRIN REHETLIHER SNAAAKDAAI ISFLHKISGG QPQQPQQHNH KPSQRKQYQS DHSITFESKE PRAVLLDTTI KMGNYDNNHS VSPSSSRWPK
401: TEVEALIRIR KNLEANYQEN GTKGPLWEEI SAGMRRLGYN RSAKRCKEKW ENINKYFKKV KESNKKRPLD SKTCPYFHQL EALYNERNKS GAMPLPLPLM
501: VTPQRQLLLS QETQTEFETD QREKVGDKED EEEGESEEDE YDEEEEGEGD NETSEFEIVL NKTSSPMDIN NNLFT
101: HKRTKEGRTG KSEGKTYRFF EELEAFETLS SYQPEPESQP AKSSAVITNA PATSSLIPWI SSSNPSTEKS SSPLKHHHQV SVQPITTNPT FLAKQPSSTT
201: PFPFYSSNNT TTVSQPPISN DLMNNVSSLN LFSSSTSSST ASDEEEDHHQ VKSSRKKRKY WKGLFTKLTK ELMEKQEKMQ KRFLETLEYR EKERISREEA
301: WRVQEIGRIN REHETLIHER SNAAAKDAAI ISFLHKISGG QPQQPQQHNH KPSQRKQYQS DHSITFESKE PRAVLLDTTI KMGNYDNNHS VSPSSSRWPK
401: TEVEALIRIR KNLEANYQEN GTKGPLWEEI SAGMRRLGYN RSAKRCKEKW ENINKYFKKV KESNKKRPLD SKTCPYFHQL EALYNERNKS GAMPLPLPLM
501: VTPQRQLLLS QETQTEFETD QREKVGDKED EEEGESEEDE YDEEEEGEGD NETSEFEIVL NKTSSPMDIN NNLFT
Arabidopsis Description
GT-2Trihelix transcription factor GT-2 [Source:UniProtKB/Swiss-Prot;Acc:Q39117]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.