Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH67857 | Soybean | nucleus | 68.35 | 69.76 |
| KRG96146 | Soybean | nucleus | 67.51 | 69.38 |
| VIT_08s0007g03820.t01 | Wine grape | nucleus | 57.41 | 61.0 |
| PGSC0003DMT400007016 | Potato | nucleus | 46.46 | 50.92 |
| PGSC0003DMT400072404 | Potato | nucleus | 34.85 | 49.88 |
| Solyc09g009250.2.1 | Tomato | nucleus | 44.28 | 48.43 |
| CDY10364 | Canola | nucleus | 38.05 | 44.58 |
| CDY11266 | Canola | nucleus | 37.54 | 43.73 |
| CDX70293 | Canola | nucleus | 41.92 | 43.61 |
| CDY04893 | Canola | nucleus | 37.21 | 43.59 |
| Bra009518.1-P | Field mustard | nucleus | 41.75 | 43.43 |
| CDX80883 | Canola | nucleus | 36.7 | 42.75 |
| AT3G10000.1 | Thale cress | nucleus | 34.51 | 42.62 |
| Bra028824.1-P | Field mustard | nucleus | 42.26 | 42.54 |
| CDY44379 | Canola | nucleus | 42.09 | 42.44 |
| Bra005777.1-P | Field mustard | nucleus | 40.91 | 42.41 |
| GSMUA_Achr8P07630_001 | Banana | nucleus | 28.28 | 42.21 |
| AT5G03680.1 | Thale cress | nucleus | 41.41 | 41.62 |
| KRH34733 | Soybean | nucleus | 33.67 | 36.9 |
| KRG92051 | Soybean | nucleus | 33.33 | 36.87 |
| KRH35147 | Soybean | nucleus | 13.47 | 28.07 |
| KRH53849 | Soybean | nucleus | 22.05 | 26.36 |
| KRH38181 | Soybean | nucleus | 21.55 | 26.12 |
| KRH64101 | Soybean | nucleus | 21.72 | 25.8 |
| KRH70307 | Soybean | nucleus | 24.58 | 24.37 |
| KRH36613 | Soybean | nucleus | 13.8 | 24.26 |
| KRG91649 | Soybean | nucleus | 26.26 | 24.22 |
| KRH08698 | Soybean | nucleus | 24.75 | 23.86 |
| KRH70308 | Soybean | nucleus | 25.08 | 23.61 |
| KRH11595 | Soybean | nucleus | 13.13 | 23.08 |
| KRH08699 | Soybean | nucleus | 25.42 | 23.05 |
| KRH35149 | Soybean | nucleus | 25.59 | 22.79 |
| KRG91651 | Soybean | nucleus | 23.57 | 22.22 |
| KRH34074 | Soybean | nucleus | 20.37 | 20.83 |
| Zm00001d032453_P001 | Maize | nucleus | 27.1 | 20.54 |
| Zm00001d013849_P001 | Maize | nucleus | 26.6 | 20.33 |
| KXG40355 | Sorghum | nucleus, plastid | 26.26 | 19.97 |
| Zm00001d027335_P001 | Maize | nucleus | 27.1 | 19.9 |
| TraesCS5A01G558200.1 | Wheat | nucleus, plastid | 26.09 | 19.75 |
| TraesCSU01G029700.1 | Wheat | nucleus | 26.09 | 19.7 |
| EER91374 | Sorghum | nucleus | 26.6 | 19.58 |
| KRG96954 | Soybean | nucleus | 19.53 | 19.33 |
| HORVU4Hr1G089120.1 | Barley | nucleus, plastid | 25.76 | 19.29 |
| KRH68714 | Soybean | nucleus | 20.2 | 19.26 |
| TraesCS1A01G176700.2 | Wheat | nucleus | 26.43 | 19.22 |
| TraesCS1D01G162400.1 | Wheat | nucleus, plastid | 26.26 | 19.09 |
| HORVU1Hr1G046940.4 | Barley | nucleus | 26.6 | 19.08 |
| TraesCS4B01G396900.1 | Wheat | nucleus | 22.22 | 19.08 |
| KRH35148 | Soybean | cytosol, mitochondrion, nucleus | 6.23 | 18.78 |
| TraesCS1B01G203300.2 | Wheat | nucleus | 25.59 | 18.67 |
| KRG92655 | Soybean | nucleus | 20.2 | 17.88 |
Protein Annotations
| EMBL:ACUP02006148 | EnsemblPlants:KRH32666 | EnsemblPlantsGene:GLYMA_10G066800 | EntrezGene:100799670 | Gene3D:1.10.10.60 | InterPro:IPR017877 |
| InterPro:Myb-like_dom | InterPro:SANT/Myb | ncoils:Coil | PANTHER:PTHR21654 | PANTHER:PTHR21654:SF5 | PFAM:PF13837 |
| PFscan:PS50090 | ProteinID:KRH32665.1 | ProteinID:KRH32666 | ProteinID:KRH32666.1 | ProteinID:KRH32667.1 | SEG:seg |
| SMART:SM00717 | UniParc:UPI000233CDA1 | UniProt:I1L984 | MapMan:15.5.20 | : | : |
Description
hypothetical protein
Coordinates
chr10:-:6494688..6498542
Molecular Weight (calculated)
68747.8 Da
IEP (calculated)
6.372
GRAVY (calculated)
-1.103
Length
594 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMEDHQHQH HHHHFGMNDL RQVVNNGPRP AHTTFPSMPP HPTEELFPGH HHRNLTPLPT HHPQQQQHFE VMMFGRDIMP PGLHDFASTP HDSAVATTTI
101: TLPTPPVTCG FDAAEGAGCI GGDPFTGRWP RQETLTLLEI RSRLDPKFKE ANHKGPLWDE VSRIMCEEHG YQRSGKKCRE KFENLYKYYK KTKEGKAGRH
201: DGKHYRFFRQ LEALYGENSN TVSVPETNVV VGSIHFQGPS QTNQDNNKFQ SHNNNNNRHC DSLSLTNSTN FDTSTSEGHD GNDHSMENES MEKRIKRKSG
301: RSWKVKIKDF IDSQMRKLVE KQKEWLDKLV KTLEEKEKER MLREEEWRKQ EANRLEREQK FWAKERAWIE ARDAALMEAL HKLTGREIMK VETDPEGTIN
401: VMTAAEVQNQ NNEDESEILN SSNVIRGADS WQESEITRLE QLRAEMETRF PYSEISEEVS WDVVATKMAD FGYERSALMC KEKWESINKE EKNSKNRKEN
501: LSRNCFYFKN NHEDQQQSSL YDQGSAYCDD DVNEQGKEIE RLQTNNGSSS PSKSNIVGNV VPSDSCFPFL MGADQGGNLW ENYGLKLNKE NQNH
101: TLPTPPVTCG FDAAEGAGCI GGDPFTGRWP RQETLTLLEI RSRLDPKFKE ANHKGPLWDE VSRIMCEEHG YQRSGKKCRE KFENLYKYYK KTKEGKAGRH
201: DGKHYRFFRQ LEALYGENSN TVSVPETNVV VGSIHFQGPS QTNQDNNKFQ SHNNNNNRHC DSLSLTNSTN FDTSTSEGHD GNDHSMENES MEKRIKRKSG
301: RSWKVKIKDF IDSQMRKLVE KQKEWLDKLV KTLEEKEKER MLREEEWRKQ EANRLEREQK FWAKERAWIE ARDAALMEAL HKLTGREIMK VETDPEGTIN
401: VMTAAEVQNQ NNEDESEILN SSNVIRGADS WQESEITRLE QLRAEMETRF PYSEISEEVS WDVVATKMAD FGYERSALMC KEKWESINKE EKNSKNRKEN
501: LSRNCFYFKN NHEDQQQSSL YDQGSAYCDD DVNEQGKEIE RLQTNNGSSS PSKSNIVGNV VPSDSCFPFL MGADQGGNLW ENYGLKLNKE NQNH
001: MDQDQHPQYG IPELRQLMKG GGRTTTTTPS TSSHFPSDFF GFNLAPVQPP PHRLHQFTTD QDMGFLPRGI HGLGGGSSTA GNNSNLNAST SGGGVGFSGF
101: LDGGGFGSGV GGDGGGTGRW PRQETLTLLE IRSRLDHKFK EANQKGPLWD EVSRIMSEEH GYQRSGKKCR EKFENLYKYY RKTKEGKAGR QDGKHYRFFR
201: QLEALYGDSN NLVSCPNHNT QFMSSALHGF HTQNPMNVTT TTSNIHNVDS VHGFHQSLSL SNNYNSSELE LMTSSSEGND SSSRRKKRSW KAKIKEFIDT
301: NMKRLIERQD VWLEKLTKVI EDKEEQRMMK EEEWRKIEAA RIDKEHLFWA KERARMEARD VAVIEALQYL TGKPLIKPLC SSPEERTNGN NEIRNNSETQ
401: NENGSDQTMT NNVCVKGSSS CWGEQEILKL MEIRTSMDST FQEILGGCSD EFLWEEIAAK LIQLGFDQRS ALLCKEKWEW ISNGMRKEKK QINKKRKDNS
501: SSCGVYYPRN EENPIYNNRE SGYNDNDPHQ INEQGNVGSS TSNANANANV TTGNPSGAMA ASTNCFPFFM GDGDQNLWES YGLRLSKEEN Q
101: LDGGGFGSGV GGDGGGTGRW PRQETLTLLE IRSRLDHKFK EANQKGPLWD EVSRIMSEEH GYQRSGKKCR EKFENLYKYY RKTKEGKAGR QDGKHYRFFR
201: QLEALYGDSN NLVSCPNHNT QFMSSALHGF HTQNPMNVTT TTSNIHNVDS VHGFHQSLSL SNNYNSSELE LMTSSSEGND SSSRRKKRSW KAKIKEFIDT
301: NMKRLIERQD VWLEKLTKVI EDKEEQRMMK EEEWRKIEAA RIDKEHLFWA KERARMEARD VAVIEALQYL TGKPLIKPLC SSPEERTNGN NEIRNNSETQ
401: NENGSDQTMT NNVCVKGSSS CWGEQEILKL MEIRTSMDST FQEILGGCSD EFLWEEIAAK LIQLGFDQRS ALLCKEKWEW ISNGMRKEKK QINKKRKDNS
501: SSCGVYYPRN EENPIYNNRE SGYNDNDPHQ INEQGNVGSS TSNANANANV TTGNPSGAMA ASTNCFPFFM GDGDQNLWES YGLRLSKEEN Q
Arabidopsis Description
PTLTrihelix transcription factor PTL [Source:UniProtKB/Swiss-Prot;Acc:Q9LZS0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.