CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH64101	Soybean	nucleus	98.16	96.2
KRH53849	Soybean	nucleus	89.8	88.53
VIT_04s0044g00510.t01	Wine grape	nucleus	53.67	51.57
Solyc11g005380.1.1	Tomato	nucleus	47.14	46.67
PGSC0003DMT400010112	Potato	nucleus	47.76	46.52
KRH35148	Soybean	cytosol, mitochondrion, nucleus	16.12	40.1
KRH70308	Soybean	nucleus	44.08	34.23
KRG91649	Soybean	nucleus	44.9	34.16
KRH35149	Soybean	nucleus	44.9	32.98
KRH08699	Soybean	nucleus	43.88	32.82
KRH70307	Soybean	nucleus	37.35	30.55
KRH08698	Soybean	nucleus	38.16	30.36
KRG91651	Soybean	nucleus	38.78	30.16
KRH36613	Soybean	nucleus	19.8	28.7
KRH11595	Soybean	nucleus	19.18	27.81
KRH35147	Soybean	nucleus	15.92	27.37
KXG40355	Sorghum	nucleus, plastid	39.59	24.84
Zm00001d013849_P001	Maize	nucleus	38.98	24.58
Zm00001d032453_P001	Maize	nucleus	38.98	24.36
EER91374	Sorghum	nucleus	38.98	23.67
TraesCS4B01G396900.1	Wheat	nucleus	33.06	23.41
HORVU4Hr1G089120.1	Barley	nucleus, plastid	37.55	23.2
TraesCSU01G029700.1	Wheat	nucleus	37.14	23.13
TraesCS5A01G558200.1	Wheat	nucleus, plastid	36.94	23.06
Zm00001d027335_P001	Maize	nucleus	37.96	22.99
GSMUA_Achr8P11770_001	Banana	nucleus	7.96	22.81
KRH34074	Soybean	nucleus	26.94	22.72
TraesCS1D01G162400.1	Wheat	nucleus, plastid	37.55	22.52
KRH67857	Soybean	nucleus	26.73	22.51
KRG96146	Soybean	nucleus	26.53	22.49
TraesCS1B01G203300.2	Wheat	nucleus	37.35	22.48
TraesCS1A01G176700.2	Wheat	nucleus	37.35	22.4
HORVU1Hr1G046940.4	Barley	nucleus	37.76	22.34
KRG96954	Soybean	nucleus	26.73	21.83
KRH32666	Soybean	nucleus	26.12	21.55
KRH68714	Soybean	nucleus	26.33	20.71
KRG92655	Soybean	nucleus	27.55	20.12
KRG92051	Soybean	nucleus	22.04	20.11
KRH34733	Soybean	nucleus	22.24	20.11

Protein Annotations

EMBL:ACUP02005743	EnsemblPlants:KRH38181	EnsemblPlantsGene:GLYMA_09G116400	EntrezGene:100787329	Gene3D:1.10.10.60	InterPro:IPR017877
InterPro:Myb-like_dom	InterPro:SANT/Myb	ncoils:Coil	PANTHER:PTHR21654	PANTHER:PTHR21654:SF14	PFAM:PF13837
PFscan:PS50090	ProteinID:KRH38181	ProteinID:KRH38181.1	SEG:seg	SMART:SM00717	UniParc:UPI0002338307
UniProt:K7LDB7	MapMan:15.5.20	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:27000362..27002785

Molecular Weight (calculated)

55825.4 Da

IEP (calculated)

7.092

GRAVY (calculated)

-1.027

Length

490 amino acids

Sequence
(BLAST)

001: MLEISTSHET PLENADGGSA AVSDGSKAEH GEDDDRNPAA NRWPREETMA LLKIRSEMDV AFKDANLKAP LWEQVSRKLS ELGYNRSAKK CKEKFENIYK
101: YHRRTKEGRF GKSNGAKTYR FFEQLEALDG NHSLLPPTTT VGDDVVLNAV PCSVSAAAHE HSSSTTSCSG KKKRKLTQFL EGLMREVIEK QETLQRKFVE
201: VLDKCEKDRM AREEAWKKEE LERIKKEREL LAQERSIAAA KDEVVLAFLR KFAEAEGTVQ LLEKIQVQND KQKNMKQNGG NDNANGGGGV TVVTDMDKQE
301: CGNTNVRVSV GNFVHMSSSR WPKDEVEALI RLRTQIDVQA QWNNNNNNND GSKGPLWEEI SSAMKSLGYD RSAKRCKEKW ENINKYFKRI KEKSKRKPQD
401: SKTCPYYHHL EALYSKKPKK VDHGNELKPE ELLMHIMVSQ SQEQQQEMQT QTQSPSEDAE RDQNQGDNED QSEYQTQMVD NNSPSIAIMS

Best Arabidopsis Sequence Match ( AT1G76880.1 )
(BLAST)

001: MMQLGGGTPT TTAAATTVTT ATAPPPQSNN NDSAATEAAA AAVGAFEVSE EMHDRGFGGN RWPRQETLAL LKIRSDMGIA FRDASVKGPL WEEVSRKMAE
101: HGYIRNAKKC KEKFENVYKY HKRTKEGRTG KSEGKTYRFF DQLEALESQS TTSLHHHQQQ TPLRPQQNNN NNNNNNNNSS IFSTPPPVTT VMPTLPSSSI
201: PPYTQQINVP SFPNISGDFL SDNSTSSSSS YSTSSDMEMG GGTATTRKKR KRKWKVFFER LMKQVVDKQE ELQRKFLEAV EKREHERLVR EESWRVQEIA
301: RINREHEILA QERSMSAAKD AAVMAFLQKL SEKQPNQPQP QPQPQQVRPS MQLNNNNQQQ PPQRSPPPQP PAPLPQPIQA VVSTLDTTKT DNGGDQNMTP
401: AASASSSRWP KVEIEALIKL RTNLDSKYQE NGPKGPLWEE ISAGMRRLGF NRNSKRCKEK WENINKYFKK VKESNKKRPE DSKTCPYFHQ LDALYRERNK
501: FHSNNNIAAS SSSSGLVKPD NSVPLMVQPE QQWPPAVTTA TTTPAAAQPD QQSQPSEQNF DDEEGTDEEY DDEDEEEENE EEEGGEFELV PSNNNNNKTT
601: NNL

Arabidopsis Description

Duplicated homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C6K3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.