Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH34733 | Soybean | nucleus | 91.43 | 90.59 |
| VIT_13s0074g00400.t01 | Wine grape | nucleus | 43.76 | 41.89 |
| GSMUA_Achr8P07630_001 | Banana | nucleus | 28.31 | 38.19 |
| KRG96146 | Soybean | nucleus | 39.11 | 36.33 |
| KRH67857 | Soybean | nucleus | 38.36 | 35.4 |
| KRH32666 | Soybean | nucleus | 36.87 | 33.33 |
| KRH35147 | Soybean | nucleus | 12.66 | 23.86 |
| KRH53849 | Soybean | nucleus | 20.67 | 22.33 |
| KRH38181 | Soybean | nucleus | 20.11 | 22.04 |
| KRH64101 | Soybean | nucleus | 20.3 | 21.8 |
| KRH70308 | Soybean | nucleus | 24.77 | 21.08 |
| KRG91649 | Soybean | nucleus | 24.21 | 20.19 |
| KRH70307 | Soybean | nucleus | 22.16 | 19.87 |
| KRH08699 | Soybean | nucleus | 23.46 | 19.24 |
| KRH35149 | Soybean | nucleus | 23.65 | 19.04 |
| KRH08698 | Soybean | nucleus | 21.79 | 18.99 |
| KRH11595 | Soybean | nucleus | 11.73 | 18.64 |
| KRG91651 | Soybean | nucleus | 21.6 | 18.41 |
| KRH36613 | Soybean | nucleus | 11.55 | 18.34 |
| Zm00001d013849_P001 | Maize | nucleus | 24.39 | 16.86 |
| KRH34074 | Soybean | nucleus | 17.69 | 16.35 |
| Zm00001d032453_P001 | Maize | nucleus | 23.84 | 16.33 |
| KRH35148 | Soybean | cytosol, mitochondrion, nucleus | 5.96 | 16.24 |
| EER91374 | Sorghum | nucleus | 24.02 | 15.99 |
| HORVU1Hr1G046940.4 | Barley | nucleus | 24.58 | 15.94 |
| TraesCS1A01G176700.2 | Wheat | nucleus | 24.21 | 15.91 |
| TraesCS1D01G162400.1 | Wheat | nucleus, plastid | 24.21 | 15.91 |
| KXG40355 | Sorghum | nucleus, plastid | 23.09 | 15.88 |
| KRG96954 | Soybean | nucleus | 17.5 | 15.67 |
| TraesCS1B01G203300.2 | Wheat | nucleus | 23.65 | 15.6 |
| KRH68714 | Soybean | nucleus | 18.06 | 15.57 |
| HORVU4Hr1G089120.1 | Barley | nucleus, plastid | 22.91 | 15.51 |
| TraesCS5A01G558200.1 | Wheat | nucleus, plastid | 22.35 | 15.29 |
| TraesCSU01G029700.1 | Wheat | nucleus | 22.35 | 15.25 |
| Zm00001d027335_P001 | Maize | nucleus | 22.53 | 14.96 |
| KRG92655 | Soybean | nucleus | 18.06 | 14.46 |
| TraesCS4B01G396900.1 | Wheat | nucleus | 18.06 | 14.02 |
Protein Annotations
| EMBL:ACUP02012727 | EnsemblPlants:KRG92051 | EnsemblPlantsGene:GLYMA_20G188100 | EntrezGene:100787750 | Gene3D:1.10.10.60 | InterPro:IPR017877 |
| InterPro:Myb-like_dom | InterPro:SANT/Myb | ncoils:Coil | PANTHER:PTHR21654 | PANTHER:PTHR21654:SF12 | PFAM:PF13837 |
| PFscan:PS50090 | ProteinID:KRG92051 | ProteinID:KRG92051.1 | SEG:seg | SMART:SM00717 | UniParc:UPI000233DBBF |
| UniProt:I1NHN7 | MapMan:15.5.20 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr20:-:42659761..42662655
Molecular Weight (calculated)
61237.0 Da
IEP (calculated)
6.553
GRAVY (calculated)
-0.897
Length
537 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDPYGLPED LRRLIPARST HLNPSDTHLI EPLCVHHGLS SAVAAATASA TPPITYDANM VGDVFFPRGF THHFAHHHDY SSSSGVNPVA TTATATATTT
101: VSDHAFCSME SAEKGWFGFD SGNNRWPRQE TLSLLEIRSR LDSKFRENNQ KAPLWNEISR IMAEEFGYQR SGKKCKEKFE NLYKYYKKTK EGKASRQDGK
201: HYRFFRQLEA ICGDQANNTH AHASTSDKTH RAGGNTAATI QKQTFTTNQD HNNGDSNNNP KCSESLSISN SSQFETSSSE NNDEDLSAIA FMMKQSRDEK
301: QKGLDHTHRP SDHRRVRKSW RTKVEEIVDS HMRKIIQTQD AWMERMLSVV EQREQEMASR EEERKRKESM WFDQQVHELW AKEKAWVEAR DAALIEVVRK
401: HIGIGIGLEA LPLVEEESPN KNKSQGSIDA NEFPSEGVDP GRSSSSRWTE MEISNLMQLR TSFEQRFREN NNGYMENGVW DEIAAKMACL GFDRSASECK
501: QIWEEISISL RRTVDECDDG AKRRPWYLGL KLTDDDL
101: VSDHAFCSME SAEKGWFGFD SGNNRWPRQE TLSLLEIRSR LDSKFRENNQ KAPLWNEISR IMAEEFGYQR SGKKCKEKFE NLYKYYKKTK EGKASRQDGK
201: HYRFFRQLEA ICGDQANNTH AHASTSDKTH RAGGNTAATI QKQTFTTNQD HNNGDSNNNP KCSESLSISN SSQFETSSSE NNDEDLSAIA FMMKQSRDEK
301: QKGLDHTHRP SDHRRVRKSW RTKVEEIVDS HMRKIIQTQD AWMERMLSVV EQREQEMASR EEERKRKESM WFDQQVHELW AKEKAWVEAR DAALIEVVRK
401: HIGIGIGLEA LPLVEEESPN KNKSQGSIDA NEFPSEGVDP GRSSSSRWTE MEISNLMQLR TSFEQRFREN NNGYMENGVW DEIAAKMACL GFDRSASECK
501: QIWEEISISL RRTVDECDDG AKRRPWYLGL KLTDDDL
001: MSGNSEGLLE SSGGGVGGSV EEEKDMKMEE TGEGAGSGGN RWPRPETLAL LRIRSEMDKA FRDSTLKAPL WEEISRKMME LGYKRSSKKC KEKFENVYKY
101: HKRTKEGRTG KSEGKTYRFF EELEAFETLS SYQPEPESQP AKSSAVITNA PATSSLIPWI SSSNPSTEKS SSPLKHHHQV SVQPITTNPT FLAKQPSSTT
201: PFPFYSSNNT TTVSQPPISN DLMNNVSSLN LFSSSTSSST ASDEEEDHHQ VKSSRKKRKY WKGLFTKLTK ELMEKQEKMQ KRFLETLEYR EKERISREEA
301: WRVQEIGRIN REHETLIHER SNAAAKDAAI ISFLHKISGG QPQQPQQHNH KPSQRKQYQS DHSITFESKE PRAVLLDTTI KMGNYDNNHS VSPSSSRWPK
401: TEVEALIRIR KNLEANYQEN GTKGPLWEEI SAGMRRLGYN RSAKRCKEKW ENINKYFKKV KESNKKRPLD SKTCPYFHQL EALYNERNKS GAMPLPLPLM
501: VTPQRQLLLS QETQTEFETD QREKVGDKED EEEGESEEDE YDEEEEGEGD NETSEFEIVL NKTSSPMDIN NNLFT
101: HKRTKEGRTG KSEGKTYRFF EELEAFETLS SYQPEPESQP AKSSAVITNA PATSSLIPWI SSSNPSTEKS SSPLKHHHQV SVQPITTNPT FLAKQPSSTT
201: PFPFYSSNNT TTVSQPPISN DLMNNVSSLN LFSSSTSSST ASDEEEDHHQ VKSSRKKRKY WKGLFTKLTK ELMEKQEKMQ KRFLETLEYR EKERISREEA
301: WRVQEIGRIN REHETLIHER SNAAAKDAAI ISFLHKISGG QPQQPQQHNH KPSQRKQYQS DHSITFESKE PRAVLLDTTI KMGNYDNNHS VSPSSSRWPK
401: TEVEALIRIR KNLEANYQEN GTKGPLWEEI SAGMRRLGYN RSAKRCKEKW ENINKYFKKV KESNKKRPLD SKTCPYFHQL EALYNERNKS GAMPLPLPLM
501: VTPQRQLLLS QETQTEFETD QREKVGDKED EEEGESEEDE YDEEEEGEGD NETSEFEIVL NKTSSPMDIN NNLFT
Arabidopsis Description
GT-2Trihelix transcription factor GT-2 [Source:UniProtKB/Swiss-Prot;Acc:Q39117]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.