Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG91651 | Soybean | nucleus | 93.4 | 29.21 |
| KRH70307 | Soybean | nucleus | 67.01 | 22.04 |
| KRH08698 | Soybean | nucleus | 68.02 | 21.75 |
| KRH70308 | Soybean | nucleus | 56.85 | 17.75 |
| KRH08699 | Soybean | nucleus | 56.85 | 17.1 |
| KRH36613 | Soybean | nucleus | 28.93 | 16.86 |
| KRG91649 | Soybean | nucleus | 54.31 | 16.61 |
| KRH11595 | Soybean | nucleus | 28.43 | 16.57 |
| KRH38181 | Soybean | nucleus | 40.1 | 16.12 |
| KRH35149 | Soybean | nucleus | 53.81 | 15.89 |
| KRH64101 | Soybean | nucleus | 40.1 | 15.8 |
| KRH53849 | Soybean | nucleus | 38.58 | 15.29 |
| TraesCS4B01G396900.1 | Wheat | nucleus | 43.65 | 12.43 |
| KXG40355 | Sorghum | nucleus, plastid | 47.21 | 11.91 |
| Zm00001d027335_P001 | Maize | nucleus | 47.21 | 11.5 |
| Zm00001d013849_P001 | Maize | nucleus | 44.67 | 11.33 |
| Zm00001d032453_P001 | Maize | nucleus | 44.67 | 11.22 |
| TraesCS5A01G558200.1 | Wheat | nucleus, plastid | 44.67 | 11.21 |
| EER91374 | Sorghum | nucleus | 45.69 | 11.15 |
| TraesCS1B01G203300.2 | Wheat | nucleus | 45.18 | 10.93 |
| TraesCSU01G029700.1 | Wheat | nucleus | 43.65 | 10.93 |
| TraesCS1D01G162400.1 | Wheat | nucleus, plastid | 45.18 | 10.89 |
| TraesCS1A01G176700.2 | Wheat | nucleus | 44.67 | 10.77 |
| HORVU1Hr1G046940.4 | Barley | nucleus | 44.16 | 10.51 |
| HORVU4Hr1G089120.1 | Barley | nucleus, plastid | 42.13 | 10.47 |
| KRH34074 | Soybean | nucleus | 30.46 | 10.33 |
| KRG96954 | Soybean | nucleus | 29.95 | 9.83 |
| KRG92655 | Soybean | nucleus | 32.99 | 9.69 |
| KRH68714 | Soybean | nucleus | 29.44 | 9.31 |
| KRH67857 | Soybean | nucleus | 21.32 | 7.22 |
| KRG96146 | Soybean | nucleus | 20.81 | 7.09 |
| KRH32666 | Soybean | nucleus | 18.78 | 6.23 |
| KRH34733 | Soybean | nucleus | 16.75 | 6.09 |
| KRG92051 | Soybean | nucleus | 16.24 | 5.96 |
| GSMUA_Achr8P11770_001 | Banana | nucleus | 3.05 | 3.51 |
| KRH35147 | Soybean | nucleus | 0.0 | 0.0 |
Protein Annotations
| EMBL:ACUP02006652 | EnsemblPlants:KRH35148 | EnsemblPlantsGene:GLYMA_10G2251001 | Gene3D:1.10.10.60 | InterPro:IPR017877 | InterPro:Myb-like_dom |
| ncoils:Coil | PANTHER:PTHR21654 | PANTHER:PTHR21654:SF50 | PFAM:PF13837 | PFscan:PS50090 | ProteinID:KRH35148 |
| ProteinID:KRH35148.1 | SEG:seg | UniParc:UPI0006ED9223 | UniProt:A0A0R0HXL0 | MapMan:35.1 | : |
Description
hypothetical protein
Coordinates
chr10:+:45563760..45564354
Molecular Weight (calculated)
23271.6 Da
IEP (calculated)
4.494
GRAVY (calculated)
-1.527
Length
197 amino acids
Sequence
(BLAST)
(BLAST)
001: SLSSSRWPKT EVHALIRLRT SLETKYQENG PKAPLWEDIS AGMLRLGYNR SAKRCKEKWE NINKYFKKVK ESNKQRREDS KTCPYFNELE ALYKEKSKTQ
101: NPFGASFHNM KPHEMMEPLM VQPEQQWRPP SQYEQGAAKE NNNNERKERE EEEEDEEEEE EEEEDENEEG DLESVEDEGG NRYEIATNKL SSVDTVE
101: NPFGASFHNM KPHEMMEPLM VQPEQQWRPP SQYEQGAAKE NNNNERKERE EEEEDEEEEE EEEEDENEEG DLESVEDEGG NRYEIATNKL SSVDTVE
001: MMQLGGGTPT TTAAATTVTT ATAPPPQSNN NDSAATEAAA AAVGAFEVSE EMHDRGFGGN RWPRQETLAL LKIRSDMGIA FRDASVKGPL WEEVSRKMAE
101: HGYIRNAKKC KEKFENVYKY HKRTKEGRTG KSEGKTYRFF DQLEALESQS TTSLHHHQQQ TPLRPQQNNN NNNNNNNNSS IFSTPPPVTT VMPTLPSSSI
201: PPYTQQINVP SFPNISGDFL SDNSTSSSSS YSTSSDMEMG GGTATTRKKR KRKWKVFFER LMKQVVDKQE ELQRKFLEAV EKREHERLVR EESWRVQEIA
301: RINREHEILA QERSMSAAKD AAVMAFLQKL SEKQPNQPQP QPQPQQVRPS MQLNNNNQQQ PPQRSPPPQP PAPLPQPIQA VVSTLDTTKT DNGGDQNMTP
401: AASASSSRWP KVEIEALIKL RTNLDSKYQE NGPKGPLWEE ISAGMRRLGF NRNSKRCKEK WENINKYFKK VKESNKKRPE DSKTCPYFHQ LDALYRERNK
501: FHSNNNIAAS SSSSGLVKPD NSVPLMVQPE QQWPPAVTTA TTTPAAAQPD QQSQPSEQNF DDEEGTDEEY DDEDEEEENE EEEGGEFELV PSNNNNNKTT
601: NNL
101: HGYIRNAKKC KEKFENVYKY HKRTKEGRTG KSEGKTYRFF DQLEALESQS TTSLHHHQQQ TPLRPQQNNN NNNNNNNNSS IFSTPPPVTT VMPTLPSSSI
201: PPYTQQINVP SFPNISGDFL SDNSTSSSSS YSTSSDMEMG GGTATTRKKR KRKWKVFFER LMKQVVDKQE ELQRKFLEAV EKREHERLVR EESWRVQEIA
301: RINREHEILA QERSMSAAKD AAVMAFLQKL SEKQPNQPQP QPQPQQVRPS MQLNNNNQQQ PPQRSPPPQP PAPLPQPIQA VVSTLDTTKT DNGGDQNMTP
401: AASASSSRWP KVEIEALIKL RTNLDSKYQE NGPKGPLWEE ISAGMRRLGF NRNSKRCKEK WENINKYFKK VKESNKKRPE DSKTCPYFHQ LDALYRERNK
501: FHSNNNIAAS SSSSGLVKPD NSVPLMVQPE QQWPPAVTTA TTTPAAAQPD QQSQPSEQNF DDEEGTDEEY DDEDEEEENE EEEGGEFELV PSNNNNNKTT
601: NNL
Arabidopsis Description
Duplicated homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C6K3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.