Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH38181 | Soybean | nucleus | 88.53 | 89.8 |
| KRH64101 | Soybean | nucleus | 89.13 | 88.6 |
| VIT_04s0044g00510.t01 | Wine grape | nucleus | 53.92 | 52.55 |
| Solyc11g005380.1.1 | Tomato | nucleus | 47.28 | 47.47 |
| PGSC0003DMT400010112 | Potato | nucleus | 47.89 | 47.32 |
| KRH35148 | Soybean | cytosol, mitochondrion, nucleus | 15.29 | 38.58 |
| KRG91649 | Soybean | nucleus | 44.87 | 34.63 |
| KRH70308 | Soybean | nucleus | 43.86 | 34.55 |
| KRH08699 | Soybean | nucleus | 44.06 | 33.44 |
| KRH35149 | Soybean | nucleus | 44.67 | 33.28 |
| KRH70307 | Soybean | nucleus | 37.02 | 30.72 |
| KRH08698 | Soybean | nucleus | 37.63 | 30.36 |
| KRG91651 | Soybean | nucleus | 37.83 | 29.84 |
| KRH36613 | Soybean | nucleus | 19.11 | 28.11 |
| KRH11595 | Soybean | nucleus | 18.71 | 27.51 |
| KRH35147 | Soybean | nucleus | 15.69 | 27.37 |
| KXG40355 | Sorghum | nucleus, plastid | 39.84 | 25.35 |
| Zm00001d013849_P001 | Maize | nucleus | 39.44 | 25.23 |
| Zm00001d032453_P001 | Maize | nucleus | 39.44 | 25.0 |
| EER91374 | Sorghum | nucleus | 39.24 | 24.16 |
| TraesCS4B01G396900.1 | Wheat | nucleus | 33.0 | 23.7 |
| TraesCSU01G029700.1 | Wheat | nucleus | 37.42 | 23.63 |
| TraesCS5A01G558200.1 | Wheat | nucleus, plastid | 37.22 | 23.57 |
| HORVU1Hr1G046940.4 | Barley | nucleus | 39.24 | 23.55 |
| HORVU4Hr1G089120.1 | Barley | nucleus, plastid | 37.42 | 23.46 |
| TraesCS1D01G162400.1 | Wheat | nucleus, plastid | 38.43 | 23.38 |
| Zm00001d027335_P001 | Maize | nucleus | 38.03 | 23.36 |
| TraesCS1B01G203300.2 | Wheat | nucleus | 38.23 | 23.34 |
| TraesCS1A01G176700.2 | Wheat | nucleus | 38.23 | 23.26 |
| KRH34074 | Soybean | nucleus | 26.96 | 23.06 |
| KRH67857 | Soybean | nucleus | 26.96 | 23.02 |
| KRG96146 | Soybean | nucleus | 26.76 | 23.01 |
| KRG96954 | Soybean | nucleus | 26.96 | 22.33 |
| KRH32666 | Soybean | nucleus | 26.36 | 22.05 |
| GSMUA_Achr8P11770_001 | Banana | nucleus | 7.44 | 21.64 |
| KRH68714 | Soybean | nucleus | 26.56 | 21.19 |
| KRG92051 | Soybean | nucleus | 22.33 | 20.67 |
| KRH34733 | Soybean | nucleus | 22.54 | 20.66 |
| KRG92655 | Soybean | nucleus | 27.77 | 20.57 |
Protein Annotations
| EMBL:ACUP02003487 | EnsemblPlants:KRH53849 | EnsemblPlantsGene:GLYMA_06G149900 | EntrezGene:100805632 | Gene3D:1.10.10.60 | InterPro:IPR017877 |
| InterPro:Myb-like_dom | InterPro:SANT/Myb | ncoils:Coil | PANTHER:PTHR21654 | PANTHER:PTHR21654:SF14 | PFAM:PF13837 |
| PFscan:PS50090 | ProteinID:KRH53849 | ProteinID:KRH53849.1 | ProteinID:KRH53850.1 | SEG:seg | SMART:SM00717 |
| UniParc:UPI000233A2D3 | UniProt:I1KBF6 | MapMan:15.5.20 | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:12238432..12241011
Molecular Weight (calculated)
56526.9 Da
IEP (calculated)
6.957
GRAVY (calculated)
-1.068
Length
497 amino acids
Sequence
(BLAST)
(BLAST)
001: MLEISTLPET ATENADGGSA AVSDGSKAEH SEDGDRNSAA NRWPREETMA LLKIRSEMDV AFKDANPKAP LWEQVSRKLA ELGYNRSAKK CKEKFENVYK
101: YHRRTKEGRF GKSNGAKTYR FFEQLEALDG NHSLPPPTTT TDNNNNVDDD DVILNAVPCS VIAAAAHEHS SSTTSSSGKM KRKLTRFLEG LMREVIEKQE
201: TLQRKFMEVL DKCEKDRMAR EEAWKKEELE RIKKERELLA HERSIAAAKD EAVLAFLKKF AEAEGTVQLL EKIQVQNDKQ KNKHQNGANA NRGGDVTVVT
301: DMDKQECGNN GVSVGNFVHM SSSRWPKDEV EALIRLRTEF DVQAQGNNNN SNNGSKGPLW EEISLAMKSI GYDRSAKRCK EKWENINKYF KRIKEKNKRK
401: PQDSKTCPYY HHLEALYSKK PKKVVDHGNE LKPEELLMHI MESQSQEQQQ EMQTQTQSSS EDAERDQDQN QDQSGYQNQM VDNNNNNNSP SSIAIMS
101: YHRRTKEGRF GKSNGAKTYR FFEQLEALDG NHSLPPPTTT TDNNNNVDDD DVILNAVPCS VIAAAAHEHS SSTTSSSGKM KRKLTRFLEG LMREVIEKQE
201: TLQRKFMEVL DKCEKDRMAR EEAWKKEELE RIKKERELLA HERSIAAAKD EAVLAFLKKF AEAEGTVQLL EKIQVQNDKQ KNKHQNGANA NRGGDVTVVT
301: DMDKQECGNN GVSVGNFVHM SSSRWPKDEV EALIRLRTEF DVQAQGNNNN SNNGSKGPLW EEISLAMKSI GYDRSAKRCK EKWENINKYF KRIKEKNKRK
401: PQDSKTCPYY HHLEALYSKK PKKVVDHGNE LKPEELLMHI MESQSQEQQQ EMQTQTQSSS EDAERDQDQN QDQSGYQNQM VDNNNNNNSP SSIAIMS
001: MMQLGGGTPT TTAAATTVTT ATAPPPQSNN NDSAATEAAA AAVGAFEVSE EMHDRGFGGN RWPRQETLAL LKIRSDMGIA FRDASVKGPL WEEVSRKMAE
101: HGYIRNAKKC KEKFENVYKY HKRTKEGRTG KSEGKTYRFF DQLEALESQS TTSLHHHQQQ TPLRPQQNNN NNNNNNNNSS IFSTPPPVTT VMPTLPSSSI
201: PPYTQQINVP SFPNISGDFL SDNSTSSSSS YSTSSDMEMG GGTATTRKKR KRKWKVFFER LMKQVVDKQE ELQRKFLEAV EKREHERLVR EESWRVQEIA
301: RINREHEILA QERSMSAAKD AAVMAFLQKL SEKQPNQPQP QPQPQQVRPS MQLNNNNQQQ PPQRSPPPQP PAPLPQPIQA VVSTLDTTKT DNGGDQNMTP
401: AASASSSRWP KVEIEALIKL RTNLDSKYQE NGPKGPLWEE ISAGMRRLGF NRNSKRCKEK WENINKYFKK VKESNKKRPE DSKTCPYFHQ LDALYRERNK
501: FHSNNNIAAS SSSSGLVKPD NSVPLMVQPE QQWPPAVTTA TTTPAAAQPD QQSQPSEQNF DDEEGTDEEY DDEDEEEENE EEEGGEFELV PSNNNNNKTT
601: NNL
101: HGYIRNAKKC KEKFENVYKY HKRTKEGRTG KSEGKTYRFF DQLEALESQS TTSLHHHQQQ TPLRPQQNNN NNNNNNNNSS IFSTPPPVTT VMPTLPSSSI
201: PPYTQQINVP SFPNISGDFL SDNSTSSSSS YSTSSDMEMG GGTATTRKKR KRKWKVFFER LMKQVVDKQE ELQRKFLEAV EKREHERLVR EESWRVQEIA
301: RINREHEILA QERSMSAAKD AAVMAFLQKL SEKQPNQPQP QPQPQQVRPS MQLNNNNQQQ PPQRSPPPQP PAPLPQPIQA VVSTLDTTKT DNGGDQNMTP
401: AASASSSRWP KVEIEALIKL RTNLDSKYQE NGPKGPLWEE ISAGMRRLGF NRNSKRCKEK WENINKYFKK VKESNKKRPE DSKTCPYFHQ LDALYRERNK
501: FHSNNNIAAS SSSSGLVKPD NSVPLMVQPE QQWPPAVTTA TTTPAAAQPD QQSQPSEQNF DDEEGTDEEY DDEDEEEENE EEEGGEFELV PSNNNNNKTT
601: NNL
Arabidopsis Description
Duplicated homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C6K3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.