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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular

Predictor Summary:
  • plastid 3
  • extracellular 5
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 5
  • golgi 4
PPI

Inferred distinct locusB in Crop

locusBlocations
VIT_19s0015g01790.t01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G18850.1 VIT_19s0015g01790.t01 AT4G26455.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc01g080590.2.1 Tomato extracellular, plasma membrane, vacuole 61.96 66.28
PGSC0003DMT400081724 Potato extracellular, golgi 60.87 65.12
KRH02170 Soybean endoplasmic reticulum 59.78 60.44
KRH50946 Soybean endoplasmic reticulum 59.78 60.44
Bra006482.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 58.7 56.25
CDX70853 Canola endoplasmic reticulum, plasma membrane 58.7 56.25
CDX88909 Canola endoplasmic reticulum, plasma membrane 58.7 56.25
AT5G18850.1 Thale cress endoplasmic reticulum, golgi 56.52 52.53
Bra002190.1-P Field mustard extracellular, plasma membrane 29.35 44.26
CDX92577 Canola extracellular 29.35 44.26
Protein Annotations
EntrezGene:100256211wikigene:100256211MapMan:35.2EMBL:AM469745EMBL:AM471679ProteinID:CAN63802
ProteinID:CAN63802.1ProteinID:CAN63854ProteinID:CAN63854.1ProteinID:CBI26139ProteinID:CBI26139.3UniProt:D7T6L8
EMBL:FN595749GO:GO:0005575GO:GO:0016020GO:GO:0016021EntrezGene:LOC100256211wikigene:LOC100256211
TIGR:TC55267TMHMM:TMhelixUniParc:UPI00015C7E9AArrayExpress:VIT_05s0020g02180EnsemblPlantsGene:VIT_05s0020g02180EnsemblPlants:VIT_05s0020g02180.t01
RefSeq:XP_002278264RefSeq:XP_002278264.1SEG:seg:::
Description
No Description!
Coordinates
chr5:+:3916727..3917499
Molecular Weight (calculated)
10474.8 Da
IEP (calculated)
10.978
GRAVY (calculated)
0.038
Length
92 amino acids
Sequence
(BLAST)
1: MATSTARVSF RVIVAILLIL LLFYVGRPLY WKISATVHEI RQNKQTVKQG ISQFVFEAQK SVGWFHDESD SGLREDRNAA AAANRKILRQ VL
Best Arabidopsis Sequence Match ( AT5G18850.1 )
(BLAST)
1: MASPSSSPTT RIWFRTVILI ALMVVLFYVG RPLYWKISAT IHDIRHNKQS VREGISQIVH EAQRSVGWYH DESDSGFREG HNKKSGIAVS RRLLFAGDQ
Arabidopsis Description
At5g18850 [Source:UniProtKB/TrEMBL;Acc:Q6NLF5]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.