Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | cytosol | 18.52 | 83.33 |
| VIT_01s0011g02200.t01 | Wine grape | cytosol | 64.81 | 9.83 |
| VIT_14s0006g00350.t01 | Wine grape | cytosol | 61.11 | 9.27 |
| VIT_17s0000g01910.t01 | Wine grape | cytosol | 57.41 | 8.18 |
| VIT_05s0020g02480.t01 | Wine grape | plastid | 57.41 | 7.18 |
| VIT_07s0104g00610.t01 | Wine grape | plastid | 55.56 | 6.93 |
Protein Annotations
| ArrayExpress:VIT_10s0042g01000 | EMBL:FN595766 | EnsemblPlants:VIT_10s0042g01000.t01 | EnsemblPlantsGene:VIT_10s0042g01000 | Gene3D:3.30.590.40 | PANTHER:PTHR20852 |
| PANTHER:PTHR20852:SF66 | ProteinID:CBI29051 | ProteinID:CBI29051.3 | UniParc:UPI0001BE3162 | UniProt:D7TEX8 | MapMan:35.2 |
Description
No Description!
Coordinates
chr10:+:14540398..14540772
Molecular Weight (calculated)
6021.3 Da
IEP (calculated)
8.253
GRAVY (calculated)
-0.365
Length
54 amino acids
Sequence
(BLAST)
(BLAST)
1: MRNTAGYDVI LKAIENLVLP HKDHIAAYGE GNERRLTGHH EMKRLTSTLS VGCC
001: MSLLADLVNL DISDNSEKII AEYIWVGGSG MDMRSKARTL PGPVTDPSKL PKWNYDGSST GQAPGQDSEV ILYPQAIFKD PFRRGNNILV MCDAYTPAGE
101: PIPTNKRHAA AEIFANPDVI AEVPWYGIEQ EYTLLQKDVN WPLGWPIGGF PGPQGPYYCS IGADKSFGRD IVDAHYKASL YAGINISGIN GEVMPGQWEF
201: QVGPSVGISA ADEIWIARYI LERITEIAGV VVSFDPKPIP GDWNGAGAHT NYSTKSMREE GGYEIIKKAI EKLGLRHKEH ISAYGEGNER RLTGHHETAD
301: INTFLWGVAN RGASIRVGRD TEKEGKGYFE DRRPASNMDP YVVTSMIAET TLLWNP
101: PIPTNKRHAA AEIFANPDVI AEVPWYGIEQ EYTLLQKDVN WPLGWPIGGF PGPQGPYYCS IGADKSFGRD IVDAHYKASL YAGINISGIN GEVMPGQWEF
201: QVGPSVGISA ADEIWIARYI LERITEIAGV VVSFDPKPIP GDWNGAGAHT NYSTKSMREE GGYEIIKKAI EKLGLRHKEH ISAYGEGNER RLTGHHETAD
301: INTFLWGVAN RGASIRVGRD TEKEGKGYFE DRRPASNMDP YVVTSMIAET TLLWNP
Arabidopsis Description
ATGSR2Glutamine synthetase [Source:UniProtKB/TrEMBL;Acc:F4ID91]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.