Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
- cytosol 2
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_10s0042g01000.t01 | Wine grape | cytosol | 83.33 | 18.52 |
| GSMUA_Achr3P14170_001 | Banana | cytosol | 41.67 | 6.49 |
| GSMUA_Achr3P07420_001 | Banana | cytosol, plasma membrane | 91.67 | 3.09 |
| GSMUA_Achr3P20250_001 | Banana | cytosol, plasma membrane | 91.67 | 3.09 |
| GSMUA_AchrUn_... | Banana | cytosol | 91.67 | 3.09 |
| GSMUA_Achr1P22290_001 | Banana | cytosol | 91.67 | 3.08 |
| GSMUA_Achr8P30880_001 | Banana | cytosol | 91.67 | 3.08 |
| GSMUA_Achr1P15140_001 | Banana | cytosol | 83.33 | 2.81 |
| GSMUA_Achr9P17480_001 | Banana | cytosol | 83.33 | 2.81 |
| GSMUA_Achr3P09120_001 | Banana | mitochondrion | 83.33 | 2.48 |
| GSMUA_Achr3P14160_001 | Banana | plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP24530_001 | EnsemblPlants:GSMUA_AchrUn_randomT24530_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG24530_001 | UniParc:UPI0002969870 | UniProt:M0UC11 | MapMan:35.2 |
Description
Glutamine synthetase, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG24530_001]
Coordinates
chrchrUn_random:-:122641936..122641974
Molecular Weight (calculated)
1320.5 Da
IEP (calculated)
3.979
GRAVY (calculated)
-0.775
Length
12 amino acids
Sequence
(BLAST)
(BLAST)
1: MEHIAAYGEG NE
001: MSSLADLINL DLSDSTDQII AEYIWIGGSG LDMRSKARTL PGPVTDPSQL PKWNYDGSST GQAPGDDSEV IIYPQAIFKD PFRRGNNILV MCDAYTPAGE
101: PIPTNKRHAA AKIFEDPSVV AEETWYGIEQ EYTLLQKDIK WPVGWPVGGF PGPQGPYYCG VGADKAFGRD IVDSHYKACL YAGINVSGTN GEVMPGQWEF
201: QVGPTVGIAA ADQVWVARYI LERITELAGV VLSLDPKPIP GDWNGAGAHT NYSTKSMRED GGYEVIKKAI EKLGLRHKEH IAAYGEGNER RLTGKHETAD
301: INTFLWGVAN RGASIRVGRD TEQAGKGYFE DRRPASNMDP YTVTSMIAES TILWKP
101: PIPTNKRHAA AKIFEDPSVV AEETWYGIEQ EYTLLQKDIK WPVGWPVGGF PGPQGPYYCG VGADKAFGRD IVDSHYKACL YAGINVSGTN GEVMPGQWEF
201: QVGPTVGIAA ADQVWVARYI LERITELAGV VLSLDPKPIP GDWNGAGAHT NYSTKSMRED GGYEVIKKAI EKLGLRHKEH IAAYGEGNER RLTGKHETAD
301: INTFLWGVAN RGASIRVGRD TEQAGKGYFE DRRPASNMDP YTVTSMIAES TILWKP
Arabidopsis Description
GLN1-4Glutamine synthetase [Source:UniProtKB/TrEMBL;Acc:A0A178UB24]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.