Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plastid 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P20250_001 | Banana | cytosol, plasma membrane | 45.45 | 18.26 |
| GSMUA_Achr1P15140_001 | Banana | cytosol | 44.76 | 17.98 |
| GSMUA_Achr3P07420_001 | Banana | cytosol, plasma membrane | 44.76 | 17.98 |
| GSMUA_AchrUn_... | Banana | cytosol | 44.76 | 17.98 |
| GSMUA_Achr8P30880_001 | Banana | cytosol | 41.96 | 16.81 |
| VIT_17s0000g01910.t01 | Wine grape | cytosol | 44.06 | 16.62 |
| GSMUA_Achr1P22290_001 | Banana | cytosol | 41.26 | 16.53 |
| GSMUA_Achr9P17480_001 | Banana | cytosol | 37.76 | 15.17 |
| GSMUA_Achr3P09120_001 | Banana | mitochondrion | 39.16 | 13.86 |
| GSMUA_Achr3P14170_001 | Banana | cytosol | 0.0 | 0.0 |
| GSMUA_AchrUn_... | Banana | cytosol | 0.0 | 0.0 |
Protein Annotations
| KEGG:00220+6.3.1.2 | KEGG:00250+6.3.1.2 | KEGG:00630+6.3.1.2 | KEGG:00910+6.3.1.2 | Gene3D:3.10.20.70 | MapMan:35.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004356 | GO:GO:0006542 | GO:GO:0006807 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr3G14160_001 | EnsemblPlants:GSMUA_Achr3P14160_001 | EnsemblPlants:GSMUA_Achr3T14160_001 |
| InterPro:Gln_synt_N | InterPro:IPR036651 | UniProt:M0SEI3 | PANTHER:PTHR20852 | PANTHER:PTHR20852:SF58 | SUPFAM:SSF54368 |
| UniParc:UPI0002956A71 | : | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G14160_001]
Coordinates
chr3:+:13279791..13284593
Molecular Weight (calculated)
16072.2 Da
IEP (calculated)
4.680
GRAVY (calculated)
-0.244
Length
143 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSKITIVSG NYWWSINSAV IPMKRCIPST PVYQSCLSSE ISSTLINLTE NIIAAEPVSD PSKLPKRNYD ESSAGQAPGD DSEVILYPQA MFKGPFRRGN
101: NILVNLRKIY SHPDVMQDEI LCGIEQEYTL LQEESQWPLG RFC
101: NILVNLRKIY SHPDVMQDEI LCGIEQEYTL LQEESQWPLG RFC
001: MSLLSDLVNL NLTDATGKII AEYIWIGGSG MDIRSKARTL PGPVTDPSKL PKWNYDGSST GQAAGEDSEV ILYPQAIFKD PFRKGNNILV MCDAYTPAGD
101: PIPTNKRHNA AKIFSHPDVA KEEPWYGIEQ EYTLMQKDVN WPIGWPVGGY PGPQGPYYCG VGADKAIGRD IVDAHYKACL YAGIGISGIN GEVMPGQWEF
201: QVGPVEGISS GDQVWVARYL LERITEISGV IVSFDPKPVP GDWNGAGAHC NYSTKTMRND GGLEVIKKAI GKLQLKHKEH IAAYGEGNER RLTGKHETAD
301: INTFSWGVAN RGASVRVGRD TEKEGKGYFE DRRPASNMDP YVVTSMIAET TILG
101: PIPTNKRHNA AKIFSHPDVA KEEPWYGIEQ EYTLMQKDVN WPIGWPVGGY PGPQGPYYCG VGADKAIGRD IVDAHYKACL YAGIGISGIN GEVMPGQWEF
201: QVGPVEGISS GDQVWVARYL LERITEISGV IVSFDPKPVP GDWNGAGAHC NYSTKTMRND GGLEVIKKAI GKLQLKHKEH IAAYGEGNER RLTGKHETAD
301: INTFSWGVAN RGASVRVGRD TEKEGKGYFE DRRPASNMDP YVVTSMIAET TILG
Arabidopsis Description
GLN1-3Glutamine synthetase [Source:UniProtKB/TrEMBL;Acc:A0A178VNQ6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.