Factsheet for GSMUA_Achr3P09120_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P17480_001	Banana	cytosol	83.91	95.22
GSMUA_AchrUn_...	Banana	cytosol	2.48	83.33
VIT_07s0104g00610.t01	Wine grape	plastid	87.62	81.76
KRH20936	Soybean	plastid	86.63	81.02
KRH11349	Soybean	plastid	86.63	81.02
VIT_05s0020g02480.t01	Wine grape	plastid	86.14	80.56
Os04t0659100-01	Rice	plastid	83.66	78.97
KXG27313	Sorghum	plastid	84.16	78.52
GSMUA_AchrUn_...	Banana	cytosol	68.81	78.09
Solyc01g080280.2.1	Tomato	plastid	83.42	78.01
GSMUA_Achr3P07420_001	Banana	cytosol, plasma membrane	68.56	77.81
PGSC0003DMT400011133	Potato	cytosol	83.17	77.78
GSMUA_Achr3P20250_001	Banana	cytosol, plasma membrane	68.32	77.53
GSMUA_Achr8P30880_001	Banana	cytosol	68.32	77.31
TraesCS2A01G500400.1	Wheat	plastid	81.44	77.05
TraesCS2D01G500600.1	Wheat	plastid	81.44	77.05
Bra035392.1-P	Field mustard	plastid	81.44	76.87
CDX74644	Canola	plastid	81.44	76.87
TraesCS2B01G528300.1	Wheat	plastid	80.45	76.83
Bra035529.1-P	Field mustard	plastid	80.94	76.4
CDY49365	Canola	plastid	74.26	76.14
AT5G35630.1	Thale cress	plastid	80.45	75.58
GSMUA_Achr1P22290_001	Banana	cytosol	66.58	75.35
GSMUA_Achr1P15140_001	Banana	cytosol	65.84	74.72
CDX84116	Canola	plastid	43.32	70.85
CDY33684	Canola	plastid	81.44	67.28
GSMUA_Achr3P14170_001	Banana	cytosol	10.89	57.14
GSMUA_Achr3P14160_001	Banana	plastid	13.86	39.16
PGSC0003DMT400045640	Potato	cytosol, plastid	15.1	29.05

Protein Annotations

KEGG:00220+6.3.1.2	KEGG:00250+6.3.1.2	KEGG:00630+6.3.1.2	KEGG:00910+6.3.1.2	MapMan:25.1.5.1.2	Gene3D:3.10.20.70
Gene3D:3.30.590.40	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004356	GO:GO:0005488
GO:GO:0005524	GO:GO:0006542	GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016874	EnsemblPlantsGene:GSMUA_Achr3G09120_001	EnsemblPlants:GSMUA_Achr3P09120_001	EnsemblPlants:GSMUA_Achr3T09120_001	InterPro:Gln_synt_N
InterPro:Gln_synt_b-grasp	InterPro:Gln_synth/guanido_kin_cat_dom	InterPro:Gln_synth_N_conserv_site	InterPro:Gln_synth_cat_dom	InterPro:Gln_synth_gly_rich_site	InterPro:IPR036651
UniProt:M0SD29	PFAM:PF00120	PFAM:PF03951	ScanProsite:PS00180	ScanProsite:PS00181	PANTHER:PTHR20852
PANTHER:PTHR20852:SF53	SMART:SM01230	SUPFAM:SSF54368	SUPFAM:SSF55931	UniParc:UPI00029484B0	SEG:seg

Description

Glutamine synthetase leaf isozyme, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr3G09120_001]

Coordinates

chr3:+:6568910..6573516

Molecular Weight (calculated)

44883.0 Da

IEP (calculated)

5.907

GRAVY (calculated)

-0.455

Length

404 amino acids

Sequence
(BLAST)

001: MWNSLLLNAQ RPKTRRGISA FKVLAVKSEN GVVSRLEDLL NLDTTPFTDK IIAEYIWIGG TGIDIRSKSR TISKPVEHAS ELPKWNYDGS STGQAPGEDS
101: EVILYPQAIF KDPFRGGNNI LVICDSYTPS GEPIPTNKRH RASQIFSDQK VIDEVPWYGI EQEYTLLQTN VQWPLGWPVG GYPGPQGPYY CAVGADKTFG
201: RDISDAHYKA CLYAGINISG TNGEVMPGQW EYQVGPSVGI EAGDHIWCSR YILERITEQA GVVLSLDPKP IEGDWNGAGC HTNYSTKTMR EEGGYEVIKK
301: AILNLSLRHM DHISAYGEGN ERRLTGKHET ANINTFSWGV ANRGCSIRVG RDTEKQGKGY LEDRRPASNM DPYVVISLLA ETTILWQPTL EAEARAAKEL
401: QLQV

Best Arabidopsis Sequence Match ( AT5G35630.3 )
(BLAST)

001: MAQILAASPT CQMRVPKHSS VIASSSKLWS SVVLKQKKQS NNKVRGFRVL ALQSDNSTVN RVETLLNLDT KPYSDRIIAE YIWIGGSGID LRSKSRTIEK
101: PVEDPSELPK WNYDGSSTGQ APGEDSEVIL YPQAIFRDPF RGGNNILVIC DTWTPAGEPI PTNKRAKAAE IFSNKKVSGE VPWFGIEQEY TLLQQNVKWP
201: LGWPVGAFPG PQGPYYCGVG ADKIWGRDIS DAHYKACLYA GINISGTNGE VMPGQWEFQV GPSVGIDAGD HVWCARYLLE RITEQAGVVL TLDPKPIEGD
301: WNGAGCHTNY STKSMREEGG FEVIKKAILN LSLRHKEHIS AYGEGNERRL TGKHETASID QFSWGVANRG CSIRVGRDTE AKGKGYLEDR RPASNMDPYI
401: VTSLLAETTL LWEPTLEAEA LAAQKLSLNV

Arabidopsis Description

GLN2Glutamine synthetase, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q43127]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.