Factsheet for GSMUA_AchrUn_randomP01460_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P20250_001	Banana	cytosol, plasma membrane	92.42	92.42
GSMUA_AchrUn_...	Banana	cytosol	3.09	91.67
GSMUA_Achr3P07420_001	Banana	cytosol, plasma membrane	90.73	90.73
OQU92979	Sorghum	cytosol	90.17	89.92
VIT_14s0006g00350.t01	Wine grape	cytosol	89.89	89.89
KRG97948	Soybean	cytosol, endoplasmic reticulum, nucleus	89.61	89.61
KRH30929	Soybean	endoplasmic reticulum	89.04	89.04
GSMUA_Achr8P30880_001	Banana	cytosol	88.76	88.52
KRH17323	Soybean	cytosol	87.36	87.36
KRH72976	Soybean	cytosol	87.08	87.08
GSMUA_Achr1P22290_001	Banana	cytosol	86.8	86.55
Os03t0223400-01	Rice	cytosol, plasma membrane	86.8	86.55
GSMUA_Achr1P15140_001	Banana	cytosol	85.67	85.67
TraesCS4A01G063800.1	Wheat	cytosol	84.83	85.31
TraesCS4D01G240700.1	Wheat	cytosol	84.55	85.03
TraesCS4B01G240900.1	Wheat	cytosol, golgi	84.55	85.03
HORVU4Hr1G066860.5	Barley	plasma membrane	84.27	78.33
Zm00001d048050_P004	Maize	cytosol	75.56	77.97
GSMUA_Achr9P17480_001	Banana	cytosol	77.25	77.25
Zm00001d028260_P005	Maize	cytosol	84.83	77.24
KRH72975	Soybean	cytosol	54.78	77.08
GSMUA_Achr3P09120_001	Banana	mitochondrion	78.09	68.81
GSMUA_Achr3P14170_001	Banana	cytosol	14.61	67.53
KRH17322	Soybean	cytosol	45.51	64.29
GSMUA_Achr3P14160_001	Banana	plastid	17.98	44.76

Protein Annotations

KEGG:00220+6.3.1.2	KEGG:00250+6.3.1.2	KEGG:00630+6.3.1.2	KEGG:00910+6.3.1.2	MapMan:25.1.5.1.1	Gene3D:3.10.20.70
Gene3D:3.30.590.40	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004356	GO:GO:0005488
GO:GO:0005524	GO:GO:0006542	GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016874	EnsemblPlantsGene:GSMUA_AchrUn_randomG01460_001	EnsemblPlants:GSMUA_AchrUn_randomP01460_001	EnsemblPlants:GSMUA_AchrUn_randomT01460_001	InterPro:Gln_synt_N
InterPro:Gln_synt_b-grasp	InterPro:Gln_synth/guanido_kin_cat_dom	InterPro:Gln_synth_N_conserv_site	InterPro:Gln_synth_cat_dom	InterPro:Gln_synth_gly_rich_site	InterPro:IPR036651
UniProt:M0U5F8	PFAM:PF00120	PFAM:PF03951	ScanProsite:PS00180	ScanProsite:PS00181	PANTHER:PTHR20852
PANTHER:PTHR20852:SF78	SMART:SM01230	SUPFAM:SSF54368	SUPFAM:SSF55931	UniParc:UPI000296A6B7	:

Description

Glutamine synthetase nodule isozyme [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG01460_001]

Coordinates

chrchrUn_random:+:5795504..5799860

Molecular Weight (calculated)

39252.3 Da

IEP (calculated)

5.118

GRAVY (calculated)

-0.414

Length

356 amino acids

Sequence
(BLAST)

001: MALLTDLINL DLSETTDKII AEYIWIGGSG LDLRSKARTL PGPVTDPSQL PKWNYDGSST GQAPGEDSEV ILYPQAIFKD PFRRGNNILV MCDCYTPAGE
101: PIPTNKRYNA AKVFSHPDVV AEEPWYGIEQ EYTLLQKDVK WPLGWPVGGF PGPQGPYYCS AGADKSFGRD IVDAHYKACL YAGINVSGIN GEVMPGQWEF
201: QVGPSVGISS GDQIWVARYI LERITEIAGV VLSLDPKPIQ GDWNGAGAHT NYSTKSMRND GGYEIIKSAI EKLGKMHKEH IAAYGEGNER RLTGRHETAD
301: INTFIWGVAN RGASIRVGRE TEQNGKGYFE DRRPASNMDP YVVTSMIAET TILWKP

Best Arabidopsis Sequence Match ( AT5G16570.1 )
(BLAST)

001: MSSLADLINL DLSDSTDQII AEYIWIGGSG LDMRSKARTL PGPVTDPSQL PKWNYDGSST GQAPGDDSEV IIYPQAIFKD PFRRGNNILV MCDAYTPAGE
101: PIPTNKRHAA AKIFEDPSVV AEETWYGIEQ EYTLLQKDIK WPVGWPVGGF PGPQGPYYCG VGADKAFGRD IVDSHYKACL YAGINVSGTN GEVMPGQWEF
201: QVGPTVGIAA ADQVWVARYI LERITELAGV VLSLDPKPIP GDWNGAGAHT NYSTKSMRED GGYEVIKKAI EKLGLRHKEH IAAYGEGNER RLTGKHETAD
301: INTFLWGVAN RGASIRVGRD TEQAGKGYFE DRRPASNMDP YTVTSMIAES TILWKP

Arabidopsis Description

GLN1-4Glutamine synthetase [Source:UniProtKB/TrEMBL;Acc:A0A178UB24]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.