Factsheet for Zm00001d048050_P004

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU92979	Sorghum	cytosol	85.22	82.35
Os03t0223400-01	Rice	cytosol, plasma membrane	79.13	76.47
GSMUA_AchrUn_...	Banana	cytosol	77.97	75.56
GSMUA_Achr3P20250_001	Banana	cytosol, plasma membrane	77.68	75.28
TraesCS4B01G240900.1	Wheat	cytosol, golgi	77.1	75.14
TraesCS4D01G240700.1	Wheat	cytosol	77.1	75.14
TraesCS4A01G063800.1	Wheat	cytosol	76.81	74.86
GSMUA_Achr3P07420_001	Banana	cytosol, plasma membrane	76.52	74.16
KRG97948	Soybean	cytosol, endoplasmic reticulum, nucleus	76.23	73.88
KRH30929	Soybean	endoplasmic reticulum	76.23	73.88
VIT_14s0006g00350.t01	Wine grape	cytosol	76.23	73.88
KRH17323	Soybean	cytosol	74.78	72.47
KRH72976	Soybean	cytosol	74.78	72.47
Zm00001d051804_P001	Maize	cytosol, extracellular, mitochondrion, plasma membrane	73.91	71.63
Zm00001d028260_P005	Maize	cytosol	80.58	71.1
Zm00001d017958_P002	Maize	cytosol	74.49	69.84
Zm00001d033747_P001	Maize	cytosol, extracellular	74.2	69.38
HORVU4Hr1G066860.5	Barley	plasma membrane	76.23	68.67
KRH17322	Soybean	cytosol	45.8	62.7
KRH72975	Soybean	cytosol	41.74	56.92

Protein Annotations

KEGG:00220+6.3.1.2	KEGG:00250+6.3.1.2	KEGG:00630+6.3.1.2	KEGG:00910+6.3.1.2	MapMan:25.1.5.1.1	Gene3D:3.10.20.70
Gene3D:3.30.590.40	EntrezGene:542215	UniProt:A0A1D6PGQ1	ProteinID:AQL08573.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004356	GO:GO:0006542	GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:Gln_synt_N	InterPro:Gln_synth/guanido_kin_cat_dom	InterPro:Gln_synth_cat_dom	InterPro:IPR036651	PFAM:PF00120
PANTHER:PTHR20852	PANTHER:PTHR20852:SF78	SMART:SM01230	SUPFAM:SSF55931	UniParc:UPI0008426BC6	EnsemblPlantsGene:Zm00001d048050
EnsemblPlants:Zm00001d048050_P004	EnsemblPlants:Zm00001d048050_T004	:	:	:	:

Description

glutamine synthetase3Glutamine synthetase3 isoform 1%3B Glutamine synthetase3 isoform 2

Coordinates

chr9:+:148903155..148910943

Molecular Weight (calculated)

37997.9 Da

IEP (calculated)

5.277

GRAVY (calculated)

-0.322

Length

345 amino acids

Sequence
(BLAST)

001: MASLTDLVNL DLSDCTDRII AEYIWVGGSG IDLRSKARVM CDCYTPQGEP IPSNKRYKAA TVFSHPDVAA EVPWYGIEQE YTLLQKDVSW PLGWPVGGYP
101: GPQARDRSFP SSTFIDCMRG PYYCAAGADK AFGRDVVDAH YKACLYAGIN ISGINGEVMP GQWEFQVGPS VGISAGDEIW VARYILERIT EMAGIVLSLD
201: PKPIKVFLVI LGSIYSDESS TESVLLAQGD WNGAGAHTNY STKSMREAGG YEVIKEAIEK LGKRHREHIA AYGEGNERRL TGRHETADIN TFKWGVANRG
301: ASIRVGRDTE KEGKGYFEDR RPASNMDPYV VTGMIADTTI LWKGN

Best Arabidopsis Sequence Match ( AT1G66200.1 )
(BLAST)

001: MSLLADLVNL DISDNSEKII AEYIWVGGSG MDMRSKARTL PGPVTDPSKL PKWNYDGSST GQAPGQDSEV ILYPQAIFKD PFRRGNNILV MCDAYTPAGE
101: PIPTNKRHAA AEIFANPDVI AEVPWYGIEQ EYTLLQKDVN WPLGWPIGGF PGPQGPYYCS IGADKSFGRD IVDAHYKASL YAGINISGIN GEVMPGQWEF
201: QVGPSVGISA ADEIWIARYI LERITEIAGV VVSFDPKPIP GDWNGAGAHT NYSTKSMREE GGYEIIKKAI EKLGLRHKEH ISAYGEGNER RLTGHHETAD
301: INTFLWGVAN RGASIRVGRD TEKEGKGYFE DRRPASNMDP YVVTSMIAET TLLWNP

Arabidopsis Description

ATGSR2Glutamine synthetase [Source:UniProtKB/TrEMBL;Acc:F4ID91]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.