CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 3
plasma membrane 2
golgi 2
cytosol 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH17323	Soybean	cytosol	96.91	96.91
VIT_14s0006g00350.t01	Wine grape	cytosol	90.45	90.45
KRG97948	Soybean	cytosol, endoplasmic reticulum, nucleus	89.89	89.89
KRH30929	Soybean	endoplasmic reticulum	89.61	89.61
GSMUA_Achr3P07420_001	Banana	cytosol, plasma membrane	87.92	87.92
KRH48674	Soybean	endoplasmic reticulum	87.92	87.92
KRH39031	Soybean	cytosol, nucleus	87.92	87.92
GSMUA_Achr3P20250_001	Banana	cytosol, plasma membrane	87.36	87.36
GSMUA_AchrUn_...	Banana	cytosol	87.08	87.08
GSMUA_Achr1P22290_001	Banana	cytosol	87.08	86.83
GSMUA_Achr8P30880_001	Banana	cytosol	86.52	86.27
KRH12677	Soybean	extracellular	29.49	84.68
Os03t0223400-01	Rice	cytosol, plasma membrane	84.83	84.59
OQU92979	Sorghum	cytosol	84.55	84.31
TraesCS4B01G240900.1	Wheat	cytosol, golgi	81.74	82.2
TraesCS4D01G240700.1	Wheat	cytosol	81.74	82.2
TraesCS4A01G063800.1	Wheat	cytosol	81.46	81.92
KRH72975	Soybean	cytosol	58.15	81.82
TraesCS4D01G047400.1	Wheat	cytosol	82.58	81.22
OQU91109	Sorghum	cytosol	83.71	81.2
Zm00001d033747_P001	Maize	cytosol, extracellular	83.99	81.03
HORVU4Hr1G007610.1	Barley	cytosol	82.02	80.66
TraesCS4B01G047400.1	Wheat	cytosol, golgi	81.74	80.39
TraesCS4A01G266900.1	Wheat	cytosol	80.9	79.56
Os03t0712800-02	Rice	cytosol, plastid	82.3	79.19
HORVU4Hr1G066860.5	Barley	plasma membrane	82.87	77.02
Zm00001d048050_P004	Maize	cytosol	72.47	74.78
Zm00001d028260_P005	Maize	cytosol	79.78	72.63
KRH17322	Soybean	cytosol	49.44	69.84
KRH20936	Soybean	plastid	77.53	63.89
KRH11349	Soybean	plastid	77.53	63.89
KRH71070	Soybean	extracellular	16.01	59.38
KRH25519	Soybean	plastid	20.51	38.42

Protein Annotations

KEGG:00220+6.3.1.2	KEGG:00250+6.3.1.2	KEGG:00630+6.3.1.2	KEGG:00910+6.3.1.2	MapMan:25.1.5.1.1	Gene3D:3.10.20.70
Gene3D:3.30.590.40	EntrezGene:547621	UniProt:A0A0R4J2T4	EMBL:ACUP02001259	EnsemblPlantsGene:GLYMA_02G244000	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004356	GO:GO:0005488	GO:GO:0005524	GO:GO:0006542
GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016874
InterPro:Gln_synt_N	InterPro:Gln_synt_b-grasp	InterPro:Gln_synth/guanido_kin_cat_dom	InterPro:Gln_synth_N_conserv_site	InterPro:Gln_synth_cat_dom	InterPro:Gln_synth_gly_rich_site
InterPro:IPR036651	EnsemblPlants:KRH72976	ProteinID:KRH72976	ProteinID:KRH72976.1	PFAM:PF00120	PFAM:PF03951
ScanProsite:PS00180	ScanProsite:PS00181	PANTHER:PTHR20852	PANTHER:PTHR20852:SF58	MetaCyc:PWY-381	MetaCyc:PWY-5675
MetaCyc:PWY-6549	MetaCyc:PWY-6963	MetaCyc:PWY-6964	SMART:SM01230	SUPFAM:SSF54368	SUPFAM:SSF55931
UniParc:UPI00019D33F0	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:43200089..43204490

Molecular Weight (calculated)

39328.6 Da

IEP (calculated)

6.377

GRAVY (calculated)

-0.428

Length

356 amino acids

Sequence
(BLAST)

001: MSLLSDLINL NLSDITDKVI AEYIWVGGSG MDMRSKARTL SGLVNDPSKL PKWNYDGSST GQAPGQDSEV ILYPQAIFRD PFRRGNNILV MCDAYTPAGE
101: PIPTNKRNKA AKIFSNPDVA AEEPWYGLEQ EYTLLQKDVQ WPLGWPLGGF PGPQGPYYCG TGANKAFGRD IVDSHYKACI YAGINISGIN GEVMPGQWEF
201: QVGPSVGISA ADELWVARYI LERITEIAGV VLSFDPKPIQ GDWNGAGAHT NYSTKLMRND GGYEIIKKAI AKLEKRHKEH IAAYGEGNER RLTGRHETAD
301: MNTFLWGVAN RGASIRVGRD TEKAGKGYFE DRRPASNMDP YVVTSMIAET TILWKP

Best Arabidopsis Sequence Match ( AT5G37600.1 )
(BLAST)

001: MSLVSDLINL NLSDSTDKII AEYIWVGGSG MDMRSKARTL PGPVTDPSQL PKWNYDGSST GQAPGEDSEV ILYPQAIFKD PFRRGNNILV MCDAYTPAGE
101: PIPTNKRHAA AKVFSNPDVA AEVPWYGIEQ EYTLLQKDVK WPVGWPIGGY PGPQGPYYCG IGADKSFGRD VVDSHYKACL YAGINISGIN GEVMPGQWEF
201: QVGPAVGISA ADEIWVARYI LERITEIAGV VVSFDPKPIP GDWNGAGAHC NYSTKSMREE GGYEIIKKAI DKLGLRHKEH IAAYGEGNER RLTGHHETAD
301: INTFLWGVAN RGASIRVGRD TEKEGKGYFE DRRPASNMDP YIVTSMIAET TILWNP

Arabidopsis Description

GLN1-1Glutamine synthetase cytosolic isozyme 1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q56WN1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.