Factsheet for HORVU4Hr1G007610.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G047400.1	Wheat	cytosol, golgi	96.96	96.96
TraesCS4D01G047400.1	Wheat	cytosol	96.69	96.69
TraesCS4A01G266900.1	Wheat	cytosol	95.58	95.58
OQU91109	Sorghum	cytosol	86.74	85.56
Zm00001d033747_P001	Maize	cytosol, extracellular	87.02	85.37
Os03t0712800-02	Rice	cytosol, plastid	87.02	85.14
KRG97948	Soybean	cytosol, endoplasmic reticulum, nucleus	82.32	83.71
VIT_14s0006g00350.t01	Wine grape	cytosol	81.77	83.15
KRH17323	Soybean	cytosol	81.77	83.15
KRH30929	Soybean	endoplasmic reticulum	81.77	83.15
GSMUA_Achr8P30880_001	Banana	cytosol	80.94	82.07
KRH72976	Soybean	cytosol	80.66	82.02
GSMUA_Achr1P22290_001	Banana	cytosol	80.39	81.51
HORVU4Hr1G066860.5	Barley	plasma membrane	77.9	73.63
HORVU6Hr1G074030.2	Barley	cytosol, mitochondrion, plastid	80.94	72.17
KRH72975	Soybean	cytosol	50.0	71.54
KRH17322	Soybean	cytosol	43.09	61.9

Protein Annotations

KEGG:00220+6.3.1.2	KEGG:00250+6.3.1.2	KEGG:00630+6.3.1.2	KEGG:00910+6.3.1.2	MapMan:25.1.5.1.1	Gene3D:3.10.20.70
Gene3D:3.30.590.40	UniProt:A0A287N3D1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004356
GO:GO:0005488	GO:GO:0005524	GO:GO:0006542	GO:GO:0006807	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016874	InterPro:Gln_synt_N	InterPro:Gln_synt_b-grasp	InterPro:Gln_synth/guanido_kin_cat_dom
InterPro:Gln_synth_N_conserv_site	InterPro:Gln_synth_cat_dom	InterPro:Gln_synth_gly_rich_site	EnsemblPlantsGene:HORVU4Hr1G007610	EnsemblPlants:HORVU4Hr1G007610.1	InterPro:IPR036651
PFAM:PF00120	PFAM:PF03951	ScanProsite:PS00180	ScanProsite:PS00181	PANTHER:PTHR20852	PANTHER:PTHR20852:SF58
SMART:SM01230	SUPFAM:SSF54368	SUPFAM:SSF55931	UniParc:UPI00029B91F6	SEG:seg	:

Description

Glutamine synthetase [Source:UniProtKB/TrEMBL;Acc:A0A287N3D1]

Coordinates

chrchr4H:+:20172876..20175861

Molecular Weight (calculated)

39711.8 Da

IEP (calculated)

6.269

GRAVY (calculated)

-0.462

Length

362 amino acids

Sequence
(BLAST)

001: MSRLADLLSL DLSGCTGKII AEYIWVGGTG MDVRSKARTL PGPVDDPSKL PKWNFDGSST GQATGDDSEV ILRPQAIFRD PFRKGNNILV ICDCYAPTGE
101: PIPSNKRYNA ARIFGHPDVK SEEPWYGIEQ EYTLLQKDTN WPIGWPLGGY PGPQGPYYCA AGAEKSYGRD IVDAHYKACL YAGINIGGIN AEVMPGQWEF
201: QVGPSVGISA GDELWAARYI LERITEIAGV VVSFDPKPIP GEWNGAGAHT NYSTKSMRSE GGYEVIKRAI KKLEARHTEH IAAYGEGNER RLTGRHETAD
301: INTFVWGVAN RGASVRVGRD TEKEGRGYFE DRRPASNMDP YVVTSMIAET TILWKAGLSN GK

Best Arabidopsis Sequence Match ( AT1G66200.1 )
(BLAST)

001: MSLLADLVNL DISDNSEKII AEYIWVGGSG MDMRSKARTL PGPVTDPSKL PKWNYDGSST GQAPGQDSEV ILYPQAIFKD PFRRGNNILV MCDAYTPAGE
101: PIPTNKRHAA AEIFANPDVI AEVPWYGIEQ EYTLLQKDVN WPLGWPIGGF PGPQGPYYCS IGADKSFGRD IVDAHYKASL YAGINISGIN GEVMPGQWEF
201: QVGPSVGISA ADEIWIARYI LERITEIAGV VVSFDPKPIP GDWNGAGAHT NYSTKSMREE GGYEIIKKAI EKLGLRHKEH ISAYGEGNER RLTGHHETAD
301: INTFLWGVAN RGASIRVGRD TEKEGKGYFE DRRPASNMDP YVVTSMIAET TLLWNP

Arabidopsis Description

ATGSR2Glutamine synthetase [Source:UniProtKB/TrEMBL;Acc:F4ID91]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.