Factsheet for TraesCS4D01G047400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G047400.1	Wheat	cytosol, golgi	97.79	97.79
HORVU4Hr1G007610.1	Barley	cytosol	96.69	96.69
TraesCS4A01G266900.1	Wheat	cytosol	96.41	96.41
OQU91109	Sorghum	cytosol	87.02	85.83
Zm00001d033747_P001	Maize	cytosol, extracellular	87.29	85.64
Os03t0712800-02	Rice	cytosol, plastid	86.74	84.86
VIT_14s0006g00350.t01	Wine grape	cytosol	82.87	84.27
KRH17323	Soybean	cytosol	82.87	84.27
KRG97948	Soybean	cytosol, endoplasmic reticulum, nucleus	82.6	83.99
KRH30929	Soybean	endoplasmic reticulum	82.04	83.43
KRH72976	Soybean	cytosol	81.22	82.58
GSMUA_Achr1P22290_001	Banana	cytosol	80.94	82.07
GSMUA_Achr8P30880_001	Banana	cytosol	80.66	81.79
TraesCS4D01G240700.1	Wheat	cytosol	79.28	81.07
KRH72975	Soybean	cytosol	51.1	73.12
KRH17322	Soybean	cytosol	43.37	62.3
TraesCS2D01G500600.1	Wheat	plastid	72.38	61.36

Protein Annotations

KEGG:00220+6.3.1.2	KEGG:00250+6.3.1.2	KEGG:00630+6.3.1.2	KEGG:00910+6.3.1.2	MapMan:25.1.5.1.1	Gene3D:3.10.20.70
Gene3D:3.30.590.40	GO:GO:0003674	GO:GO:0003824	GO:GO:0004356	GO:GO:0006542	GO:GO:0006807
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Gln_synt_N	InterPro:Gln_synt_b-grasp
InterPro:Gln_synth/guanido_kin_cat_dom	InterPro:Gln_synth_N_conserv_site	InterPro:Gln_synth_cat_dom	InterPro:Gln_synth_gly_rich_site	InterPro:IPR036651	PFAM:PF00120
PFAM:PF03951	ScanProsite:PS00180	ScanProsite:PS00181	PANTHER:PTHR20852	PANTHER:PTHR20852:SF58	SMART:SM01230
SUPFAM:SSF54368	SUPFAM:SSF55931	EnsemblPlantsGene:TraesCS4D01G047400	EnsemblPlants:TraesCS4D01G047400.1	SEG:seg	:

Description

No Description!

Coordinates

chr4D:-:22946848..22949676

Molecular Weight (calculated)

39485.6 Da

IEP (calculated)

5.482

GRAVY (calculated)

-0.423

Length

362 amino acids

Sequence
(BLAST)

001: MSPLADLLSL DLSGCTGKII AEYIWVGGTG MDVRSKARTL PGPVEDPSKL PKWNFDGSST GQATGDDSEV ILCPQAIFKD PFRRGNNILV ICDCYAPNGE
101: PIPSNKRYNA ARIFGHPDVK AEEPWYGIEQ EYTLLQKDTN WPIGWPLGGY PGPQGPYYCA AGAEKSYGRD IVDAHYKACL YAGINIGGIN AEVMPGQWEF
201: QVGPSVGISA GDELWAARYI LERITEIAGV VVSFDPKPIP GEWNGAGAHT NYSTKSMRSE GGYEVIKKAI QKLEARHMEH IAAYGEGNER RLTGRHETAD
301: INTFVWGVAN RGASVRVGRD TEKEGKGYFE DRRPASNMDP YVVTSMIAET TILSKAGLSN GK

Best Arabidopsis Sequence Match ( AT1G66200.1 )
(BLAST)

001: MSLLADLVNL DISDNSEKII AEYIWVGGSG MDMRSKARTL PGPVTDPSKL PKWNYDGSST GQAPGQDSEV ILYPQAIFKD PFRRGNNILV MCDAYTPAGE
101: PIPTNKRHAA AEIFANPDVI AEVPWYGIEQ EYTLLQKDVN WPLGWPIGGF PGPQGPYYCS IGADKSFGRD IVDAHYKASL YAGINISGIN GEVMPGQWEF
201: QVGPSVGISA ADEIWIARYI LERITEIAGV VVSFDPKPIP GDWNGAGAHT NYSTKSMREE GGYEIIKKAI EKLGLRHKEH ISAYGEGNER RLTGHHETAD
301: INTFLWGVAN RGASIRVGRD TEKEGKGYFE DRRPASNMDP YVVTSMIAET TLLWNP

Arabidopsis Description

ATGSR2Glutamine synthetase [Source:UniProtKB/TrEMBL;Acc:F4ID91]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.