Factsheet for TraesCS4A01G266900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G047400.1	Wheat	cytosol, golgi	96.69	96.69
TraesCS4D01G047400.1	Wheat	cytosol	96.41	96.41
HORVU4Hr1G007610.1	Barley	cytosol	95.58	95.58
Zm00001d033747_P001	Maize	cytosol, extracellular	86.74	85.09
OQU91109	Sorghum	cytosol	85.91	84.74
Os03t0712800-02	Rice	cytosol, plastid	85.64	83.78
KRG97948	Soybean	cytosol, endoplasmic reticulum, nucleus	81.77	83.15
KRH30929	Soybean	endoplasmic reticulum	81.22	82.58
KRH17323	Soybean	cytosol	80.66	82.02
VIT_14s0006g00350.t01	Wine grape	cytosol	80.66	82.02
KRH72976	Soybean	cytosol	79.56	80.9
GSMUA_Achr1P22290_001	Banana	cytosol	79.56	80.67
GSMUA_Achr8P30880_001	Banana	cytosol	79.28	80.39
TraesCS6A01G298100.2	Wheat	cytosol	78.73	80.06
TraesCS4A01G063800.1	Wheat	cytosol	76.8	78.53
KRH72975	Soybean	cytosol	50.0	71.54
KRH17322	Soybean	cytosol	42.54	61.11
TraesCS2A01G500400.1	Wheat	plastid	71.27	60.42

Protein Annotations

KEGG:00220+6.3.1.2	KEGG:00250+6.3.1.2	KEGG:00630+6.3.1.2	KEGG:00910+6.3.1.2	MapMan:25.1.5.1.1	Gene3D:3.10.20.70
Gene3D:3.30.590.40	GO:GO:0003674	GO:GO:0003824	GO:GO:0004356	GO:GO:0006542	GO:GO:0006807
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Gln_synt_N	InterPro:Gln_synt_b-grasp
InterPro:Gln_synth/guanido_kin_cat_dom	InterPro:Gln_synth_N_conserv_site	InterPro:Gln_synth_cat_dom	InterPro:Gln_synth_gly_rich_site	InterPro:IPR036651	PFAM:PF00120
PFAM:PF03951	ScanProsite:PS00180	ScanProsite:PS00181	PANTHER:PTHR20852	PANTHER:PTHR20852:SF58	SMART:SM01230
SUPFAM:SSF54368	SUPFAM:SSF55931	EnsemblPlantsGene:TraesCS4A01G266900	EnsemblPlants:TraesCS4A01G266900.1	SEG:seg	:

Description

No Description!

Coordinates

chr4A:+:579428268..579430952

Molecular Weight (calculated)

39614.6 Da

IEP (calculated)

5.133

GRAVY (calculated)

-0.438

Length

362 amino acids

Sequence
(BLAST)

001: MSPLAELLSL DLSGCTGKII AEYIWVGGTG MDVRSKARTL PGPVDDPSKL PKWNFDGSST GQATGDDSEV ILCPQAIFRD PFRKGNNILV ICDCYAPNGE
101: PIPSNKRYNA ARIFGHPDVK DEEPWYGIEQ EYTLLQKDTN WPIGWPLGGY PGPQGPYYCA VGAEKSYGRD IVDAHYKACL YAGINIGGIN AEVMPGQWEF
201: QVGPSVGISA GDELWAARYI LERITEIAGV VVSFDPKPIP GEWNGAGAHT NYSTKSMRSE GGYEVIKKAI QKLEARHMDH IAAYGEGNER RLTGRHETAD
301: INTFVWGVAN RGASVRVGRD TDKEGKGYFE DRRPGSNMDP YVVTSMIADT TILWNAGLSN GR

Best Arabidopsis Sequence Match ( AT3G17820.1 )
(BLAST)

001: MSLLSDLVNL NLTDATGKII AEYIWIGGSG MDIRSKARTL PGPVTDPSKL PKWNYDGSST GQAAGEDSEV ILYPQAIFKD PFRKGNNILV MCDAYTPAGD
101: PIPTNKRHNA AKIFSHPDVA KEEPWYGIEQ EYTLMQKDVN WPIGWPVGGY PGPQGPYYCG VGADKAIGRD IVDAHYKACL YAGIGISGIN GEVMPGQWEF
201: QVGPVEGISS GDQVWVARYL LERITEISGV IVSFDPKPVP GDWNGAGAHC NYSTKTMRND GGLEVIKKAI GKLQLKHKEH IAAYGEGNER RLTGKHETAD
301: INTFSWGVAN RGASVRVGRD TEKEGKGYFE DRRPASNMDP YVVTSMIAET TILG

Arabidopsis Description

GLN1-3Glutamine synthetase [Source:UniProtKB/TrEMBL;Acc:A0A178VNQ6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.