CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH72976	Soybean	cytosol	96.91	96.91
VIT_14s0006g00350.t01	Wine grape	cytosol	90.45	90.45
KRG97948	Soybean	cytosol, endoplasmic reticulum, nucleus	89.61	89.61
KRH30929	Soybean	endoplasmic reticulum	89.33	89.33
GSMUA_Achr3P07420_001	Banana	cytosol, plasma membrane	88.48	88.48
KRH48674	Soybean	endoplasmic reticulum	88.48	88.48
KRH39031	Soybean	cytosol, nucleus	88.48	88.48
GSMUA_Achr3P20250_001	Banana	cytosol, plasma membrane	87.92	87.92
GSMUA_AchrUn_...	Banana	cytosol	87.36	87.36
GSMUA_Achr1P22290_001	Banana	cytosol	87.08	86.83
KRH12677	Soybean	extracellular	30.06	86.29
GSMUA_Achr8P30880_001	Banana	cytosol	86.52	86.27
Os03t0223400-01	Rice	cytosol, plasma membrane	85.67	85.43
OQU92979	Sorghum	cytosol	85.67	85.43
TraesCS4B01G240900.1	Wheat	cytosol, golgi	82.87	83.33
TraesCS4D01G240700.1	Wheat	cytosol	82.87	83.33
TraesCS4A01G063800.1	Wheat	cytosol	82.58	83.05
TraesCS4D01G047400.1	Wheat	cytosol	84.27	82.87
KRH72975	Soybean	cytosol	58.15	81.82
HORVU4Hr1G007610.1	Barley	cytosol	83.15	81.77
Zm00001d033747_P001	Maize	cytosol, extracellular	84.55	81.57
TraesCS4B01G047400.1	Wheat	cytosol, golgi	82.87	81.49
OQU91109	Sorghum	cytosol	83.99	81.47
TraesCS4A01G266900.1	Wheat	cytosol	82.02	80.66
Os03t0712800-02	Rice	cytosol, plastid	83.15	80.0
HORVU4Hr1G066860.5	Barley	plasma membrane	83.99	78.07
Zm00001d048050_P004	Maize	cytosol	72.47	74.78
Zm00001d028260_P005	Maize	cytosol	80.34	73.15
KRH17322	Soybean	cytosol	50.0	70.63
KRH20936	Soybean	plastid	77.53	63.89
KRH11349	Soybean	plastid	77.53	63.89
KRH71070	Soybean	extracellular	15.73	58.33
KRH25519	Soybean	plastid	20.79	38.95

Protein Annotations

KEGG:00220+6.3.1.2	KEGG:00250+6.3.1.2	KEGG:00630+6.3.1.2	KEGG:00910+6.3.1.2	MapMan:25.1.5.1.1	Gene3D:3.10.20.70
Gene3D:3.30.590.40	EntrezGene:547798	UniProt:A0A0R0GR05	ProteinID:AAC97935.1	EnsemblPlantsGene:GLYMA_14G213300	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004356	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006542	GO:GO:0006807
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009399	GO:GO:0009987	GO:GO:0016874
GO:GO:0042802	InterPro:Gln_synt_N	InterPro:Gln_synt_b-grasp	InterPro:Gln_synth/guanido_kin_cat_dom	InterPro:Gln_synth_N_conserv_site	InterPro:Gln_synth_cat_dom
InterPro:Gln_synth_gly_rich_site	InterPro:IPR036651	EnsemblPlants:KRH17323	ProteinID:KRH17323	ProteinID:KRH17323.1	UniProt:O82560
PFAM:PF00120	PFAM:PF03951	ScanProsite:PS00180	ScanProsite:PS00181	PANTHER:PTHR20852	PANTHER:PTHR20852:SF58
MetaCyc:PWY-381	MetaCyc:PWY-5675	MetaCyc:PWY-6549	MetaCyc:PWY-6963	MetaCyc:PWY-6964	SMART:SM01230
SUPFAM:SSF54368	SUPFAM:SSF55931	UniParc:UPI000012B6B9	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr14:-:47828854..47833070

Molecular Weight (calculated)

39210.4 Da

IEP (calculated)

6.524

GRAVY (calculated)

-0.444

Length

356 amino acids

Sequence
(BLAST)

001: MSLLSDLINL NLSDITDKVI AEYIWVGGSG MDMRSKARTL SGPVKDPSKL PKWNYDGSST GQAPGQDSEV ILYPQAIFKD PFRRGSNILV MCDAYTPAGE
101: PIPTNKRNNA AKIFGHPDVA AEEPWYGLEQ EYTLLQKDVQ WPLGWPLGGF PGPQGPYYCG TGANKAFGRD IVDSHYKACI YAGINISGIN GEVMPGQWEF
201: QVGPSIGISA ADELWVARYI LERITEIAGV VLSFDPKPIQ GDWNGAGAHT NYSTKSMRND GGYEVIKKAI AKLEKRHKEH IAAYGEGNER RLTGRHETAD
301: MNTFVWGVAN RGASIRVGRD TEKAGKGYFE DRRPASNMDP YVVTSMIAET TILWKP

Best Arabidopsis Sequence Match ( AT5G16570.1 )
(BLAST)

001: MSSLADLINL DLSDSTDQII AEYIWIGGSG LDMRSKARTL PGPVTDPSQL PKWNYDGSST GQAPGDDSEV IIYPQAIFKD PFRRGNNILV MCDAYTPAGE
101: PIPTNKRHAA AKIFEDPSVV AEETWYGIEQ EYTLLQKDIK WPVGWPVGGF PGPQGPYYCG VGADKAFGRD IVDSHYKACL YAGINVSGTN GEVMPGQWEF
201: QVGPTVGIAA ADQVWVARYI LERITELAGV VLSLDPKPIP GDWNGAGAHT NYSTKSMRED GGYEVIKKAI EKLGLRHKEH IAAYGEGNER RLTGKHETAD
301: INTFLWGVAN RGASIRVGRD TEQAGKGYFE DRRPASNMDP YTVTSMIAES TILWKP

Arabidopsis Description

GLN1-4Glutamine synthetase [Source:UniProtKB/TrEMBL;Acc:A0A178UB24]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.