Factsheet for GSMUA_Achr1P22290_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P30880_001	Banana	cytosol	92.72	92.72
GSMUA_AchrUn_...	Banana	cytosol	3.08	91.67
GSMUA_Achr3P20250_001	Banana	cytosol, plasma membrane	87.96	88.2
VIT_14s0006g00350.t01	Wine grape	cytosol	87.68	87.92
GSMUA_Achr3P07420_001	Banana	cytosol, plasma membrane	87.39	87.64
KRH72976	Soybean	cytosol	86.83	87.08
KRH17323	Soybean	cytosol	86.83	87.08
GSMUA_AchrUn_...	Banana	cytosol	86.55	86.8
KRG97948	Soybean	cytosol, endoplasmic reticulum, nucleus	86.55	86.8
KRH30929	Soybean	endoplasmic reticulum	85.43	85.67
OQU91109	Sorghum	cytosol	85.43	83.11
Zm00001d033747_P001	Maize	cytosol, extracellular	85.43	82.66
GSMUA_Achr1P15140_001	Banana	cytosol	81.79	82.02
TraesCS4D01G047400.1	Wheat	cytosol	82.07	80.94
HORVU4Hr1G007610.1	Barley	cytosol	81.51	80.39
TraesCS4B01G047400.1	Wheat	cytosol, golgi	81.23	80.11
TraesCS4A01G266900.1	Wheat	cytosol	80.67	79.56
Os03t0712800-02	Rice	cytosol, plastid	82.35	79.46
KRH72975	Soybean	cytosol	53.78	75.89
GSMUA_Achr9P17480_001	Banana	cytosol	73.95	74.16
GSMUA_Achr3P09120_001	Banana	mitochondrion	75.35	66.58
GSMUA_Achr3P14170_001	Banana	cytosol	14.29	66.23
KRH17322	Soybean	cytosol	45.66	64.68
GSMUA_Achr3P14160_001	Banana	plastid	16.53	41.26

Protein Annotations

KEGG:00220+6.3.1.2	KEGG:00250+6.3.1.2	KEGG:00630+6.3.1.2	KEGG:00910+6.3.1.2	MapMan:25.1.5.1.1	Gene3D:3.10.20.70
Gene3D:3.30.590.40	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004356	GO:GO:0005488
GO:GO:0005524	GO:GO:0006542	GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016874	EnsemblPlantsGene:GSMUA_Achr1G22290_001	EnsemblPlants:GSMUA_Achr1P22290_001	EnsemblPlants:GSMUA_Achr1T22290_001	InterPro:Gln_synt_N
InterPro:Gln_synt_b-grasp	InterPro:Gln_synth/guanido_kin_cat_dom	InterPro:Gln_synth_N_conserv_site	InterPro:Gln_synth_cat_dom	InterPro:Gln_synth_gly_rich_site	InterPro:IPR036651
UniProt:M0S237	PFAM:PF00120	PFAM:PF03951	ScanProsite:PS00180	ScanProsite:PS00181	PANTHER:PTHR20852
PANTHER:PTHR20852:SF78	SMART:SM01230	SUPFAM:SSF54368	SUPFAM:SSF55931	UniParc:UPI0002956CBF	:

Description

Glutamine synthetase nodule isozyme [Source:GMGC_GENE;Acc:GSMUA_Achr1G22290_001]

Coordinates

chr1:+:16741644..16744396

Molecular Weight (calculated)

39291.3 Da

IEP (calculated)

5.705

GRAVY (calculated)

-0.393

Length

357 amino acids

Sequence
(BLAST)

001: MSLLTDLINL NLSDCTEKIV AEYIWVGGSG MDIRSKARTL SGPVGDPSQL PRWNYDGSST GQAPGQDSEV ILYPQAIYRD PFRRGNDILV MCDCYTPQGE
101: PIPTNKRHNA AKIFSNPAVA AEETWFGIEQ EYTLLRKDVK WPLGWPIGGF PGPQGPYYCS AGADKAFGRD IVDAHYKACL YAGIDISGIN GEVMPGQWEF
201: QVGPCVGISA GDQLWVARYL LERITEIAGV VLSFDPKPIQ GDWNGAGAHT NYSTKSMRSN GGYEVIKEAI QKLGLRHKEH IAAYGEGNER RLTGRHETAD
301: INTFVWGVAN RGASIRVGRD TEKSGKGYFE DRRPASNMDP YVVTSMIAET TILWNSA

Best Arabidopsis Sequence Match ( AT5G37600.1 )
(BLAST)

001: MSLVSDLINL NLSDSTDKII AEYIWVGGSG MDMRSKARTL PGPVTDPSQL PKWNYDGSST GQAPGEDSEV ILYPQAIFKD PFRRGNNILV MCDAYTPAGE
101: PIPTNKRHAA AKVFSNPDVA AEVPWYGIEQ EYTLLQKDVK WPVGWPIGGY PGPQGPYYCG IGADKSFGRD VVDSHYKACL YAGINISGIN GEVMPGQWEF
201: QVGPAVGISA ADEIWVARYI LERITEIAGV VVSFDPKPIP GDWNGAGAHC NYSTKSMREE GGYEIIKKAI DKLGLRHKEH IAAYGEGNER RLTGHHETAD
301: INTFLWGVAN RGASIRVGRD TEKEGKGYFE DRRPASNMDP YIVTSMIAET TILWNP

Arabidopsis Description

GLN1-1Glutamine synthetase cytosolic isozyme 1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q56WN1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.