Factsheet for GSMUA_Achr1P15140_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P20250_001	Banana	cytosol, plasma membrane	87.64	87.64
GSMUA_Achr3P07420_001	Banana	cytosol, plasma membrane	86.52	86.52
GSMUA_AchrUn_...	Banana	cytosol	85.67	85.67
GSMUA_AchrUn_...	Banana	cytosol	2.81	83.33
GSMUA_Achr1P22290_001	Banana	cytosol	82.02	81.79
GSMUA_Achr8P30880_001	Banana	cytosol	82.02	81.79
GSMUA_Achr9P17480_001	Banana	cytosol	73.31	73.31
GSMUA_Achr3P14170_001	Banana	cytosol	14.33	66.23
GSMUA_Achr3P09120_001	Banana	mitochondrion	74.72	65.84
GSMUA_Achr3P14160_001	Banana	plastid	17.98	44.76

Protein Annotations

KEGG:00220+6.3.1.2	KEGG:00250+6.3.1.2	KEGG:00630+6.3.1.2	KEGG:00910+6.3.1.2	MapMan:25.1.5.1.1	Gene3D:3.10.20.70
Gene3D:3.30.590.40	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004356	GO:GO:0005488
GO:GO:0005524	GO:GO:0006542	GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016874	EnsemblPlantsGene:GSMUA_Achr1G15140_001	EnsemblPlants:GSMUA_Achr1P15140_001	EnsemblPlants:GSMUA_Achr1T15140_001	InterPro:Gln_synt_N
InterPro:Gln_synt_b-grasp	InterPro:Gln_synth/guanido_kin_cat_dom	InterPro:Gln_synth_N_conserv_site	InterPro:Gln_synth_cat_dom	InterPro:Gln_synth_gly_rich_site	InterPro:IPR036651
UniProt:M0S022	PFAM:PF00120	PFAM:PF03951	ScanProsite:PS00180	ScanProsite:PS00181	PANTHER:PTHR20852
PANTHER:PTHR20852:SF59	SMART:SM01230	SUPFAM:SSF54368	SUPFAM:SSF55931	UniParc:UPI000294E14D	SEG:seg

Description

Glutamine synthetase nodule isozyme [Source:GMGC_GENE;Acc:GSMUA_Achr1G15140_001]

Coordinates

chr1:+:11411884..11416041

Molecular Weight (calculated)

39283.4 Da

IEP (calculated)

6.410

GRAVY (calculated)

-0.474

Length

356 amino acids

Sequence
(BLAST)

001: MSLLRELLDL NLTETTEKII AEYIWIGGSG MDMRSKARTL PGPVSDPSKL PKWNYDGSST GQAPGDNSEV IVHPQAIFKD PFRRGNNILV VCDAYTPAGD
101: PIPTNKRFNA QKIFSHPDVI AEEPWYGIEQ EYTLFQRDVP WPLGWPVGGF PGPQGPYYCG TGADKAFGRD IVNSHYKACL YAGINISGIN GEVMPGQWEF
201: QVGPAVGITA GDQLWVARYI LERITEIAGA VLSFDPKPMQ GDWNGAGAHT NYSTKSMRND GGIEVIKKAI EKLSKKHKEH IAAYGEGNDR RLTGRHETAD
301: ISSFSWGVAN RGASVRVGRE TEKDGKGYFE DRRPASNMDP YVVTSMIAET TILWKP

Best Arabidopsis Sequence Match ( AT1G66200.1 )
(BLAST)

001: MSLLADLVNL DISDNSEKII AEYIWVGGSG MDMRSKARTL PGPVTDPSKL PKWNYDGSST GQAPGQDSEV ILYPQAIFKD PFRRGNNILV MCDAYTPAGE
101: PIPTNKRHAA AEIFANPDVI AEVPWYGIEQ EYTLLQKDVN WPLGWPIGGF PGPQGPYYCS IGADKSFGRD IVDAHYKASL YAGINISGIN GEVMPGQWEF
201: QVGPSVGISA ADEIWIARYI LERITEIAGV VVSFDPKPIP GDWNGAGAHT NYSTKSMREE GGYEIIKKAI EKLGLRHKEH ISAYGEGNER RLTGHHETAD
301: INTFLWGVAN RGASIRVGRD TEKEGKGYFE DRRPASNMDP YVVTSMIAET TLLWNP

Arabidopsis Description

ATGSR2Glutamine synthetase [Source:UniProtKB/TrEMBL;Acc:F4ID91]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.