Factsheet for GSMUA_Achr3P14170_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	6.49	41.67
GSMUA_Achr3P07420_001	Banana	cytosol, plasma membrane	68.83	14.89
GSMUA_Achr3P20250_001	Banana	cytosol, plasma membrane	68.83	14.89
GSMUA_AchrUn_...	Banana	cytosol	67.53	14.61
GSMUA_Achr8P30880_001	Banana	cytosol	67.53	14.57
VIT_17s0000g01910.t01	Wine grape	cytosol	71.43	14.51
GSMUA_Achr1P15140_001	Banana	cytosol	66.23	14.33
GSMUA_Achr1P22290_001	Banana	cytosol	66.23	14.29
GSMUA_Achr9P17480_001	Banana	cytosol	57.14	12.36
GSMUA_Achr3P09120_001	Banana	mitochondrion	57.14	10.89
GSMUA_Achr3P14160_001	Banana	plastid	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr3P14170_001	EnsemblPlants:GSMUA_Achr3T14170_001	EnsemblPlantsGene:GSMUA_Achr3G14170_001	Gene3D:3.30.590.40	GO:GO:0003674	GO:GO:0003824
PANTHER:PTHR20852	PANTHER:PTHR20852:SF66	SEG:seg	UniParc:UPI0002958DB8	UniProt:M0SEI4	MapMan:35.1

Description

Glutamine synthetase cytosolic isozyme 1 [Source:GMGC_GENE;Acc:GSMUA_Achr3G14170_001]

Coordinates

chr3:+:13308713..13310693

Molecular Weight (calculated)

8206.0 Da

IEP (calculated)

9.289

GRAVY (calculated)

-0.292

Length

77 amino acids

Sequence
(BLAST)

1: MRRITEIAGV VLSLDPKLIQ GDGNGAGAGV GAHANCSTKS MRNDGGIDVI KKEIEKLGLR HKEHIAGYGL PFIRHDT

Best Arabidopsis Sequence Match ( AT5G16570.1 )
(BLAST)

001: MSSLADLINL DLSDSTDQII AEYIWIGGSG LDMRSKARTL PGPVTDPSQL PKWNYDGSST GQAPGDDSEV IIYPQAIFKD PFRRGNNILV MCDAYTPAGE
101: PIPTNKRHAA AKIFEDPSVV AEETWYGIEQ EYTLLQKDIK WPVGWPVGGF PGPQGPYYCG VGADKAFGRD IVDSHYKACL YAGINVSGTN GEVMPGQWEF
201: QVGPTVGIAA ADQVWVARYI LERITELAGV VLSLDPKPIP GDWNGAGAHT NYSTKSMRED GGYEVIKKAI EKLGLRHKEH IAAYGEGNER RLTGKHETAD
301: INTFLWGVAN RGASIRVGRD TEQAGKGYFE DRRPASNMDP YTVTSMIAES TILWKP

Arabidopsis Description

GLN1-4Glutamine synthetase [Source:UniProtKB/TrEMBL;Acc:A0A178UB24]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.