Factsheet for GSMUA_Achr9P17480_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P09120_001	Banana	mitochondrion	95.22	83.91
GSMUA_AchrUn_...	Banana	cytosol	2.81	83.33
GSMUA_AchrUn_...	Banana	cytosol	77.25	77.25
GSMUA_Achr3P07420_001	Banana	cytosol, plasma membrane	77.25	77.25
GSMUA_Achr3P20250_001	Banana	cytosol, plasma membrane	76.12	76.12
KRH20936	Soybean	plastid	91.85	75.69
KRH11349	Soybean	plastid	91.85	75.69
GSMUA_Achr8P30880_001	Banana	cytosol	75.56	75.35
VIT_07s0104g00610.t01	Wine grape	plastid	91.57	75.29
VIT_05s0020g02480.t01	Wine grape	plastid	91.29	75.23
GSMUA_Achr1P22290_001	Banana	cytosol	74.16	73.95
Os04t0659100-01	Rice	plastid	88.2	73.36
GSMUA_Achr1P15140_001	Banana	cytosol	73.31	73.31
Solyc01g080280.2.1	Tomato	plastid	87.92	72.45
CDX74644	Canola	plastid	87.08	72.43
Bra035392.1-P	Field mustard	plastid	87.08	72.43
CDY49365	Canola	plastid	80.06	72.33
PGSC0003DMT400011133	Potato	cytosol	87.64	72.22
Bra035529.1-P	Field mustard	plastid	86.8	72.2
KXG27313	Sorghum	plastid	87.64	72.06
TraesCS2A01G500400.1	Wheat	plastid	86.24	71.9
TraesCS2D01G500600.1	Wheat	plastid	86.24	71.9
TraesCS2B01G528300.1	Wheat	plastid	85.11	71.63
AT5G35630.1	Thale cress	plastid	85.96	71.16
CDX84116	Canola	plastid	44.94	64.78
CDY33684	Canola	plastid	87.08	63.39
GSMUA_Achr3P14170_001	Banana	cytosol	12.36	57.14
GSMUA_Achr3P14160_001	Banana	plastid	15.17	37.76
PGSC0003DMT400045640	Potato	cytosol, plastid	15.73	26.67

Protein Annotations

KEGG:00220+6.3.1.2	KEGG:00250+6.3.1.2	KEGG:00630+6.3.1.2	KEGG:00910+6.3.1.2	MapMan:25.1.5.1.2	Gene3D:3.10.20.70
Gene3D:3.30.590.40	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004356	GO:GO:0005488
GO:GO:0005524	GO:GO:0006542	GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016874	EnsemblPlantsGene:GSMUA_Achr9G17480_001	EnsemblPlants:GSMUA_Achr9P17480_001	EnsemblPlants:GSMUA_Achr9T17480_001	InterPro:Gln_synt_N
InterPro:Gln_synt_b-grasp	InterPro:Gln_synth/guanido_kin_cat_dom	InterPro:Gln_synth_N_conserv_site	InterPro:Gln_synth_cat_dom	InterPro:Gln_synth_gly_rich_site	InterPro:IPR036651
UniProt:M0U155	PFAM:PF00120	PFAM:PF03951	ScanProsite:PS00180	ScanProsite:PS00181	PANTHER:PTHR20852
PANTHER:PTHR20852:SF53	SMART:SM01230	SUPFAM:SSF54368	SUPFAM:SSF55931	UniParc:UPI0002967AD4	SEG:seg

Description

Glutamine synthetase leaf isozyme, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr9G17480_001]

Coordinates

chr9:-:12077720..12082153

Molecular Weight (calculated)

39513.4 Da

IEP (calculated)

5.145

GRAVY (calculated)

-0.495

Length

356 amino acids

Sequence
(BLAST)

001: MAPFTDKIIA EYIWIGGTGI DIRSKSRTIT RPVEYPSELP KWNYDGSSTG QAPGEDSEVI LYPQAVFKDP FRGGNNILVI CDSYTPSGEP IPTNKRYRAA
101: QIFSEQKVID EVPWYGIEQE YTLLQTNVKW PLGWPVGGYP GPQGPYYCAV GADKSFGRDI SDAHYKACLY AGINISGTNG EVMPGQWEYQ VGPSVGIEAG
201: DHIWCSRYIL ERITEQAGVI LSLDPKPIEG DWNGAGCHTN FSTKSMREEG GYEVIKKAIL NLSLRHMDHI SAYGEGNERR LTGKHETANI NTFSWGVANR
301: GCSIRVGRDT EKQGKGYLED RRPASNMDPY VVTSLLAETT ILWQPSLEAE ARAAKE

Best Arabidopsis Sequence Match ( AT5G35630.3 )
(BLAST)

001: MAQILAASPT CQMRVPKHSS VIASSSKLWS SVVLKQKKQS NNKVRGFRVL ALQSDNSTVN RVETLLNLDT KPYSDRIIAE YIWIGGSGID LRSKSRTIEK
101: PVEDPSELPK WNYDGSSTGQ APGEDSEVIL YPQAIFRDPF RGGNNILVIC DTWTPAGEPI PTNKRAKAAE IFSNKKVSGE VPWFGIEQEY TLLQQNVKWP
201: LGWPVGAFPG PQGPYYCGVG ADKIWGRDIS DAHYKACLYA GINISGTNGE VMPGQWEFQV GPSVGIDAGD HVWCARYLLE RITEQAGVVL TLDPKPIEGD
301: WNGAGCHTNY STKSMREEGG FEVIKKAILN LSLRHKEHIS AYGEGNERRL TGKHETASID QFSWGVANRG CSIRVGRDTE AKGKGYLEDR RPASNMDPYI
401: VTSLLAETTL LWEPTLEAEA LAAQKLSLNV

Arabidopsis Description

GLN2Glutamine synthetase, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q43127]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.