Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035392.1-P | Field mustard | plastid | 92.56 | 92.99 |
| CDX74644 | Canola | plastid | 92.56 | 92.99 |
| Bra035529.1-P | Field mustard | plastid | 91.86 | 92.29 |
| CDY49365 | Canola | plastid | 83.49 | 91.12 |
| CDX84116 | Canola | plastid | 49.77 | 86.64 |
| GSMUA_Achr9P17480_001 | Banana | cytosol | 71.16 | 85.96 |
| Solyc01g080280.2.1 | Tomato | plastid | 85.58 | 85.19 |
| PGSC0003DMT400011133 | Potato | cytosol | 85.35 | 84.95 |
| VIT_07s0104g00610.t01 | Wine grape | plastid | 83.72 | 83.14 |
| VIT_05s0020g02480.t01 | Wine grape | plastid | 82.79 | 82.41 |
| CDY33684 | Canola | plastid | 92.56 | 81.39 |
| GSMUA_Achr3P09120_001 | Banana | mitochondrion | 75.58 | 80.45 |
| Os04t0659100-01 | Rice | plastid | 77.67 | 78.04 |
| TraesCS2B01G528300.1 | Wheat | plastid | 76.28 | 77.54 |
| AT5G16570.1 | Thale cress | cytosol | 64.19 | 77.53 |
| TraesCS2A01G500400.1 | Wheat | plastid | 76.98 | 77.52 |
| TraesCS2D01G500600.1 | Wheat | plastid | 76.98 | 77.52 |
| AT5G37600.1 | Thale cress | cytosol | 63.72 | 76.97 |
| KXG27313 | Sorghum | plastid | 76.74 | 76.21 |
| AT1G66200.3 | Thale cress | cytosol | 64.65 | 76.16 |
| AT3G17820.1 | Thale cress | cytosol | 61.4 | 74.58 |
| AT1G48470.1 | Thale cress | cytosol | 58.14 | 70.82 |
| KRH25519 | Soybean | plastid | 22.09 | 50.0 |
Protein Annotations
| KEGG:00220+6.3.1.2 | KEGG:00250+6.3.1.2 | KEGG:00630+6.3.1.2 | KEGG:00910+6.3.1.2 | MapMan:25.1.5.1.2 | Gene3D:3.10.20.70 |
| Gene3D:3.30.590.40 | EntrezGene:833535 | UniProt:A0A178UUP0 | ProteinID:AED93993.1 | ProteinID:AED93994.1 | ProteinID:AED93995.1 |
| EMBL:AF428319 | EMBL:AF428461 | EMBL:AK317110 | ArrayExpress:AT5G35630 | EnsemblPlantsGene:AT5G35630 | RefSeq:AT5G35630 |
| TAIR:AT5G35630 | RefSeq:AT5G35630-TAIR-G | EnsemblPlants:AT5G35630.1 | TAIR:AT5G35630.1 | EMBL:AY081252 | EMBL:AY088222 |
| EMBL:AY091114 | EMBL:AY122977 | Unigene:At.24218 | UniProt:B9DGD1 | ProteinID:BAA88761.1 | ProteinID:BAB09304.1 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004356 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
| GO:GO:0005829 | GO:GO:0005840 | GO:GO:0006542 | GO:GO:0006807 | GO:GO:0006950 | GO:GO:0007568 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009535 | GO:GO:0009536 |
| GO:GO:0009570 | GO:GO:0009579 | GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009719 | GO:GO:0009735 |
| GO:GO:0009941 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016874 | GO:GO:0019676 | GO:GO:0022626 |
| GO:GO:0046686 | GO:GO:0048046 | Symbol:GS2 | InterPro:Gln_synt_N | InterPro:Gln_synt_b-grasp | InterPro:Gln_synth/guanido_kin_cat_dom |
| InterPro:Gln_synth_N_conserv_site | InterPro:Gln_synth_cat_dom | InterPro:Gln_synth_gly_rich_site | InterPro:IPR036651 | RefSeq:NP_001031969.1 | RefSeq:NP_001078639.1 |
| RefSeq:NP_198413.1 | ProteinID:OAO96481.1 | PFAM:PF00120 | PFAM:PF03951 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0006339 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | ScanProsite:PS00180 | ScanProsite:PS00181 | PANTHER:PTHR20852 | PANTHER:PTHR20852:SF53 | UniProt:Q43127 |
| EMBL:S69727 | SMART:SM01230 | SUPFAM:SSF54368 | SUPFAM:SSF55931 | UniParc:UPI0000000D39 | SEG:seg |
Description
GLN2Glutamine synthetase, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q43127]
Coordinates
chr5:+:13830429..13833507
Molecular Weight (calculated)
47413.1 Da
IEP (calculated)
6.864
GRAVY (calculated)
-0.413
Length
430 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQILAASPT CQMRVPKHSS VIASSSKLWS SVVLKQKKQS NNKVRGFRVL ALQSDNSTVN RVETLLNLDT KPYSDRIIAE YIWIGGSGID LRSKSRTIEK
101: PVEDPSELPK WNYDGSSTGQ APGEDSEVIL YPQAIFRDPF RGGNNILVIC DTWTPAGEPI PTNKRAKAAE IFSNKKVSGE VPWFGIEQEY TLLQQNVKWP
201: LGWPVGAFPG PQGPYYCGVG ADKIWGRDIS DAHYKACLYA GINISGTNGE VMPGQWEFQV GPSVGIDAGD HVWCARYLLE RITEQAGVVL TLDPKPIEGD
301: WNGAGCHTNY STKSMREEGG FEVIKKAILN LSLRHKEHIS AYGEGNERRL TGKHETASID QFSWGVANRG CSIRVGRDTE AKGKGYLEDR RPASNMDPYI
401: VTSLLAETTL LWEPTLEAEA LAAQKLSLNV
101: PVEDPSELPK WNYDGSSTGQ APGEDSEVIL YPQAIFRDPF RGGNNILVIC DTWTPAGEPI PTNKRAKAAE IFSNKKVSGE VPWFGIEQEY TLLQQNVKWP
201: LGWPVGAFPG PQGPYYCGVG ADKIWGRDIS DAHYKACLYA GINISGTNGE VMPGQWEFQV GPSVGIDAGD HVWCARYLLE RITEQAGVVL TLDPKPIEGD
301: WNGAGCHTNY STKSMREEGG FEVIKKAILN LSLRHKEHIS AYGEGNERRL TGKHETASID QFSWGVANRG CSIRVGRDTE AKGKGYLEDR RPASNMDPYI
401: VTSLLAETTL LWEPTLEAEA LAAQKLSLNV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.