Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
- golgi 1
- extracellular 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY16439 | Canola | cytosol | 93.15 | 95.51 |
| CDY52941 | Canola | cytosol | 93.15 | 95.51 |
| Bra039756.1-P | Field mustard | cytosol | 92.88 | 95.22 |
| AT5G37600.1 | Thale cress | cytosol | 89.86 | 92.13 |
| KRH48674 | Soybean | endoplasmic reticulum | 86.03 | 88.2 |
| VIT_01s0011g02200.t01 | Wine grape | cytosol | 86.03 | 88.2 |
| PGSC0003DMT400034421 | Potato | cytosol | 85.48 | 88.14 |
| Solyc11g011380.1.1 | Tomato | extracellular | 85.48 | 88.14 |
| KRH39031 | Soybean | cytosol, nucleus | 85.21 | 87.36 |
| AT5G16570.1 | Thale cress | cytosol | 84.38 | 86.52 |
| Solyc05g051250.2.1 | Tomato | unclear | 83.01 | 85.11 |
| PGSC0003DMT400037822 | Potato | cytosol | 82.47 | 84.55 |
| AT3G17820.1 | Thale cress | cytosol | 81.64 | 84.18 |
| AT1G48470.1 | Thale cress | cytosol | 76.71 | 79.32 |
| AT5G35630.1 | Thale cress | plastid | 76.16 | 64.65 |
Protein Annotations
| KEGG:00220+6.3.1.2 | KEGG:00250+6.3.1.2 | KEGG:00630+6.3.1.2 | KEGG:00910+6.3.1.2 | MapMan:25.1.5.1.1 | Gene3D:3.10.20.70 |
| Gene3D:3.30.590.40 | EntrezGene:833738 | EntrezGene:842935 | ProteinID:AEE34476.1 | ArrayExpress:AT1G66200 | EnsemblPlantsGene:AT1G66200 |
| RefSeq:AT1G66200 | TAIR:AT1G66200 | RefSeq:AT1G66200-TAIR-G | EnsemblPlants:AT1G66200.3 | TAIR:AT1G66200.3 | Symbol:ATGSR2 |
| Unigene:At.47484 | UniProt:F4ID91 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004356 |
| GO:GO:0005488 | GO:GO:0005507 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005829 | GO:GO:0005840 | GO:GO:0006542 |
| GO:GO:0006807 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009536 |
| GO:GO:0009570 | GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009941 | GO:GO:0009987 | GO:GO:0016874 |
| GO:GO:0022626 | GO:GO:0042128 | GO:GO:0048046 | Symbol:GSR2 | InterPro:Gln_synt_N | InterPro:Gln_synth/guanido_kin_cat_dom |
| InterPro:Gln_synth_N_conserv_site | InterPro:Gln_synth_cat_dom | InterPro:Gln_synth_gly_rich_site | InterPro:IPR036651 | RefSeq:NP_001185327.1 | PFAM:PF00120 |
| PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00180 | ScanProsite:PS00181 | PANTHER:PTHR20852 | PANTHER:PTHR20852:SF58 |
| SMART:SM01230 | SUPFAM:SSF54368 | SUPFAM:SSF55931 | UniParc:UPI0001E92B91 | : | : |
Description
ATGSR2Glutamine synthetase [Source:UniProtKB/TrEMBL;Acc:F4ID91]
Coordinates
chr1:-:24655499..24657683
Molecular Weight (calculated)
40392.6 Da
IEP (calculated)
4.926
GRAVY (calculated)
-0.385
Length
365 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLLADLVNL DISDNSEKII AEYIWVGGSG MDMRSKARTL PGPVTDPSKL PKWNYDGSST GQAPGQDSEV ILYPQAIFKD PFRRGNNILI NVFYRFDQVM
101: CDAYTPAGEP IPTNKRHAAA EIFANPDVIA EVPWYGIEQE YTLLQKDVNW PLGWPIGGFP GPQGPYYCSI GADKSFGRDI VDAHYKASLY AGINISGING
201: EVMPGQWEFQ VGPSVGISAA DEIWIARYIL ERITEIAGVV VSFDPKPIPG DWNGAGAHTN YSTKSMREEG GYEIIKKAIE KLGLRHKEHI SAYGEGNERR
301: LTGHHETADI NTFLWGVANR GASIRVGRDT EKEGKGYFED RRPASNMDPY VVTSMIAETT LLWNP
101: CDAYTPAGEP IPTNKRHAAA EIFANPDVIA EVPWYGIEQE YTLLQKDVNW PLGWPIGGFP GPQGPYYCSI GADKSFGRDI VDAHYKASLY AGINISGING
201: EVMPGQWEFQ VGPSVGISAA DEIWIARYIL ERITEIAGVV VSFDPKPIPG DWNGAGAHTN YSTKSMREEG GYEIIKKAIE KLGLRHKEHI SAYGEGNERR
301: LTGHHETADI NTFLWGVANR GASIRVGRDT EKEGKGYFED RRPASNMDPY VVTSMIAETT LLWNP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.