Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039756.1-P | Field mustard | cytosol | 99.72 | 99.72 |
| CDY52941 | Canola | cytosol | 99.44 | 99.44 |
| CDX74573 | Canola | cytosol | 93.82 | 93.82 |
| AT1G66200.3 | Thale cress | cytosol | 95.51 | 93.15 |
| CDY01727 | Canola | cytosol | 91.29 | 93.12 |
| Solyc11g011380.1.1 | Tomato | extracellular | 88.2 | 88.7 |
| PGSC0003DMT400034421 | Potato | cytosol | 88.2 | 88.7 |
| CDY49656 | Canola | cytosol | 88.48 | 88.48 |
| CDX69442 | Canola | cytosol | 88.2 | 88.2 |
| KRH48674 | Soybean | endoplasmic reticulum | 88.2 | 88.2 |
| CDX85499 | Canola | cytosol | 88.2 | 88.2 |
| CDY38104 | Canola | cytosol | 88.2 | 88.2 |
| VIT_01s0011g02200.t01 | Wine grape | cytosol | 87.64 | 87.64 |
| KRH39031 | Soybean | cytosol, nucleus | 87.64 | 87.64 |
| Solyc05g051250.2.1 | Tomato | unclear | 85.96 | 85.96 |
| PGSC0003DMT400037822 | Potato | cytosol | 85.39 | 85.39 |
| CDX95818 | Canola | cytosol | 84.27 | 84.75 |
| CDX92165 | Canola | cytosol | 84.27 | 84.75 |
| CDY68179 | Canola | cytosol | 83.99 | 84.46 |
| CDY68590 | Canola | cytosol | 83.99 | 84.46 |
| CDX75942 | Canola | cytosol | 79.49 | 79.72 |
| CDX82343 | Canola | cytosol | 79.21 | 79.44 |
| CDY49672 | Canola | cytosol | 78.65 | 78.43 |
| CDX93671 | Canola | cytosol | 78.65 | 78.43 |
| CDY49365 | Canola | plastid | 74.44 | 67.26 |
| CDX74644 | Canola | plastid | 79.21 | 65.89 |
| CDX84116 | Canola | plastid | 43.82 | 63.16 |
| CDY33684 | Canola | plastid | 79.21 | 57.67 |
| CDY27610 | Canola | cytosol | 32.02 | 54.55 |
| CDY27650 | Canola | mitochondrion | 25.0 | 52.66 |
| CDX98429 | Canola | plastid | 21.35 | 36.19 |
Protein Annotations
| KEGG:00220+6.3.1.2 | KEGG:00250+6.3.1.2 | KEGG:00630+6.3.1.2 | KEGG:00910+6.3.1.2 | MapMan:25.1.5.1.1 | Gene3D:3.10.20.70 |
| Gene3D:3.30.590.40 | EnsemblPlants:CDY16439 | ProteinID:CDY16439 | ProteinID:CDY16439.1 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004356 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006542 | GO:GO:0006807 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016874 | EnsemblPlantsGene:GSBRNA2T00090998001 |
| InterPro:Gln_synt_N | InterPro:Gln_synt_b-grasp | InterPro:Gln_synth/guanido_kin_cat_dom | InterPro:Gln_synth_N_conserv_site | InterPro:Gln_synth_cat_dom | InterPro:Gln_synth_gly_rich_site |
| InterPro:IPR036651 | PFAM:PF00120 | PFAM:PF03951 | ScanProsite:PS00180 | ScanProsite:PS00181 | PANTHER:PTHR20852 |
| PANTHER:PTHR20852:SF58 | MetaCyc:PWY-381 | MetaCyc:PWY-5675 | MetaCyc:PWY-6549 | MetaCyc:PWY-6963 | MetaCyc:PWY-6964 |
| GO:Q42625 | UniProt:Q42625 | SMART:SM01230 | SUPFAM:SSF54368 | SUPFAM:SSF55931 | UniParc:UPI00000A5EA9 |
Description
BnaA02g12430DGlutamine synthetase [Source:UniProtKB/TrEMBL;Acc:Q42625]
Coordinates
chrLK032063:-:701379..703860
Molecular Weight (calculated)
39246.2 Da
IEP (calculated)
5.013
GRAVY (calculated)
-0.428
Length
356 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLLTDLVNL DLSDNTEKII AEYIWVGGSG MDMRSKARTL PGPVTDPSKL PKWNYDGSST GQAPGEDSEV ILYPQAIFKD PFRRGNNILV MCDTYTPAGE
101: PIPTNKRHAA AQIFSNPDVV AEVPWYGIEQ EYTLLQKDVN WPVGWPIGGF PGPQGPYYCS VGADKSFGRD IVDAHYKACL YAGINISGIN GEVMPGQWEF
201: QVGPSVGISA ADEVWIARFI LERITEIAGV VVSFDPKPIP GDWNGAGAHT NYSTKSMREE GGYEIIKKAI DKLGLRHKEH ISAYGEGNER RLTGHHETAD
301: INTFKWGVAN RGASIRVGRD TEKEGKGYFE DRRPASNMDP YTVTSMIAET TLLWNP
101: PIPTNKRHAA AQIFSNPDVV AEVPWYGIEQ EYTLLQKDVN WPVGWPIGGF PGPQGPYYCS VGADKSFGRD IVDAHYKACL YAGINISGIN GEVMPGQWEF
201: QVGPSVGISA ADEVWIARFI LERITEIAGV VVSFDPKPIP GDWNGAGAHT NYSTKSMREE GGYEIIKKAI DKLGLRHKEH ISAYGEGNER RLTGHHETAD
301: INTFKWGVAN RGASIRVGRD TEKEGKGYFE DRRPASNMDP YTVTSMIAET TLLWNP
001: MSLLADLVNL DISDNSEKII AEYIWVGGSG MDMRSKARTL PGPVTDPSKL PKWNYDGSST GQAPGQDSEV ILYPQAIFKD PFRRGNNILV MCDAYTPAGE
101: PIPTNKRHAA AEIFANPDVI AEVPWYGIEQ EYTLLQKDVN WPLGWPIGGF PGPQGPYYCS IGADKSFGRD IVDAHYKASL YAGINISGIN GEVMPGQWEF
201: QVGPSVGISA ADEIWIARYI LERITEIAGV VVSFDPKPIP GDWNGAGAHT NYSTKSMREE GGYEIIKKAI EKLGLRHKEH ISAYGEGNER RLTGHHETAD
301: INTFLWGVAN RGASIRVGRD TEKEGKGYFE DRRPASNMDP YVVTSMIAET TLLWNP
101: PIPTNKRHAA AEIFANPDVI AEVPWYGIEQ EYTLLQKDVN WPLGWPIGGF PGPQGPYYCS IGADKSFGRD IVDAHYKASL YAGINISGIN GEVMPGQWEF
201: QVGPSVGISA ADEIWIARYI LERITEIAGV VVSFDPKPIP GDWNGAGAHT NYSTKSMREE GGYEIIKKAI EKLGLRHKEH ISAYGEGNER RLTGHHETAD
301: INTFLWGVAN RGASIRVGRD TEKEGKGYFE DRRPASNMDP YVVTSMIAET TLLWNP
Arabidopsis Description
ATGSR2Glutamine synthetase [Source:UniProtKB/TrEMBL;Acc:F4ID91]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.