Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022247.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDX92165 | Canola | cytosol | 100.0 | 100.0 |
| CDY68590 | Canola | cytosol | 96.05 | 96.05 |
| CDY68179 | Canola | cytosol | 96.05 | 96.05 |
| AT3G17820.1 | Thale cress | cytosol | 94.07 | 94.07 |
| CDX75942 | Canola | cytosol | 91.53 | 91.27 |
| CDX82343 | Canola | cytosol | 91.24 | 90.99 |
| Os02t0735200-02 | Rice | cytosol | 86.44 | 85.96 |
| TraesCS6A01G298100.2 | Wheat | cytosol | 86.16 | 85.67 |
| KXG30808 | Sorghum | cytosol | 86.16 | 85.67 |
| CDX74573 | Canola | cytosol | 85.88 | 85.39 |
| TraesCS6B01G327500.1 | Wheat | cytosol, golgi, plastid, unclear | 85.88 | 85.39 |
| CDY01727 | Canola | cytosol | 83.9 | 85.1 |
| VIT_01s0011g02200.t01 | Wine grape | cytosol | 85.31 | 84.83 |
| Zm00001d051804_P001 | Maize | cytosol, extracellular, mitochondrion, plasma membrane | 85.03 | 84.55 |
| CDY52941 | Canola | cytosol | 84.75 | 84.27 |
| CDY16439 | Canola | cytosol | 84.75 | 84.27 |
| CDY38104 | Canola | cytosol | 84.46 | 83.99 |
| CDY49656 | Canola | cytosol | 84.18 | 83.71 |
| CDX85499 | Canola | cytosol | 84.18 | 83.71 |
| CDX69442 | Canola | cytosol | 83.62 | 83.15 |
| CDY49672 | Canola | cytosol | 83.05 | 82.35 |
| CDX93671 | Canola | cytosol | 83.05 | 82.35 |
| Zm00001d017958_P002 | Maize | cytosol | 83.9 | 80.71 |
| HORVU6Hr1G074030.2 | Barley | cytosol, mitochondrion, plastid | 86.16 | 75.12 |
| Solyc12g041870.1.1 | Tomato | cytosol | 74.01 | 72.98 |
| CDY27610 | Canola | cytosol | 38.7 | 65.55 |
| CDY49365 | Canola | plastid | 72.03 | 64.72 |
| CDX74644 | Canola | plastid | 75.99 | 62.85 |
| CDY27650 | Canola | mitochondrion | 29.38 | 61.54 |
| CDX84116 | Canola | plastid | 42.66 | 61.13 |
| CDY33684 | Canola | plastid | 75.99 | 55.01 |
| CDX98429 | Canola | plastid | 23.45 | 39.52 |
Protein Annotations
| KEGG:00220+6.3.1.2 | KEGG:00250+6.3.1.2 | KEGG:00630+6.3.1.2 | KEGG:00910+6.3.1.2 | MapMan:25.1.5.1.1 | Gene3D:3.10.20.70 |
| Gene3D:3.30.590.40 | EnsemblPlants:CDX95818 | ProteinID:CDX95818 | ProteinID:CDX95818.1 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004356 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006542 | GO:GO:0006807 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016874 | EnsemblPlantsGene:GSBRNA2T00101764001 |
| InterPro:Gln_synt_N | InterPro:Gln_synt_b-grasp | InterPro:Gln_synth/guanido_kin_cat_dom | InterPro:Gln_synth_N_conserv_site | InterPro:Gln_synth_cat_dom | InterPro:Gln_synth_gly_rich_site |
| InterPro:IPR036651 | PFAM:PF00120 | PFAM:PF03951 | ScanProsite:PS00180 | ScanProsite:PS00181 | PANTHER:PTHR20852 |
| PANTHER:PTHR20852:SF59 | MetaCyc:PWY-381 | MetaCyc:PWY-5675 | MetaCyc:PWY-6549 | MetaCyc:PWY-6963 | MetaCyc:PWY-6964 |
| SMART:SM01230 | SUPFAM:SSF54368 | SUPFAM:SSF55931 | UniParc:UPI00019D33E4 | GO:V9M2V8 | UniProt:V9M2V8 |
| SEG:seg | : | : | : | : | : |
Description
BnaC05g35690DGlutamine synthetase [Source:UniProtKB/TrEMBL;Acc:V9M2V8]
Coordinates
chrLK031891:-:487949..490135
Molecular Weight (calculated)
38515.5 Da
IEP (calculated)
6.263
GRAVY (calculated)
-0.406
Length
354 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLLSDLVNL NLSDSTEKII AEYIWIGGSG MDIRSKARTL PGPVSDPSKL PKWNYDGSST GQAAGDDSEV ILYPQAIFRD PFRKGNNILV MCDAYTPAGN
101: PIPTNKRHNA AKIFSNPKVA SEEPWYGIEQ EYTLMQKGVN WPIGWPIGGF PGPQGPYYCG VGADKAIGRD IVDAHYKACI YAGIGISGVN GEVMPGQWEF
201: QVGPVEGISA GDQVWVARYL LERITEISGV NVSFDPKPVP GDWNGAGAHC NYSTKSMRND GGLAVIKKAI EKLQVKHKEH IAAYGEGNER RLTGKHETAD
301: INTFSWGVAN RGASVRVGRD TEKEGKGYFE DRRPASNMDP YVVTSMIAET TILG
101: PIPTNKRHNA AKIFSNPKVA SEEPWYGIEQ EYTLMQKGVN WPIGWPIGGF PGPQGPYYCG VGADKAIGRD IVDAHYKACI YAGIGISGVN GEVMPGQWEF
201: QVGPVEGISA GDQVWVARYL LERITEISGV NVSFDPKPVP GDWNGAGAHC NYSTKSMRND GGLAVIKKAI EKLQVKHKEH IAAYGEGNER RLTGKHETAD
301: INTFSWGVAN RGASVRVGRD TEKEGKGYFE DRRPASNMDP YVVTSMIAET TILG
001: MSLLSDLVNL NLTDATGKII AEYIWIGGSG MDIRSKARTL PGPVTDPSKL PKWNYDGSST GQAAGEDSEV ILYPQAIFKD PFRKGNNILV MCDAYTPAGD
101: PIPTNKRHNA AKIFSHPDVA KEEPWYGIEQ EYTLMQKDVN WPIGWPVGGY PGPQGPYYCG VGADKAIGRD IVDAHYKACL YAGIGISGIN GEVMPGQWEF
201: QVGPVEGISS GDQVWVARYL LERITEISGV IVSFDPKPVP GDWNGAGAHC NYSTKTMRND GGLEVIKKAI GKLQLKHKEH IAAYGEGNER RLTGKHETAD
301: INTFSWGVAN RGASVRVGRD TEKEGKGYFE DRRPASNMDP YVVTSMIAET TILG
101: PIPTNKRHNA AKIFSHPDVA KEEPWYGIEQ EYTLMQKDVN WPIGWPVGGY PGPQGPYYCG VGADKAIGRD IVDAHYKACL YAGIGISGIN GEVMPGQWEF
201: QVGPVEGISS GDQVWVARYL LERITEISGV IVSFDPKPVP GDWNGAGAHC NYSTKTMRND GGLEVIKKAI GKLQLKHKEH IAAYGEGNER RLTGKHETAD
301: INTFSWGVAN RGASVRVGRD TEKEGKGYFE DRRPASNMDP YVVTSMIAET TILG
Arabidopsis Description
GLN1-3Glutamine synthetase [Source:UniProtKB/TrEMBL;Acc:A0A178VNQ6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.