Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY68590 | Canola | cytosol | 100.0 | 100.0 |
| Bra021276.1-P | Field mustard | cytosol | 99.44 | 99.44 |
| CDX92165 | Canola | cytosol | 96.05 | 96.05 |
| CDX95818 | Canola | cytosol | 96.05 | 96.05 |
| AT3G17820.1 | Thale cress | cytosol | 92.94 | 92.94 |
| CDX75942 | Canola | cytosol | 90.68 | 90.42 |
| CDX82343 | Canola | cytosol | 89.83 | 89.58 |
| Os02t0735200-02 | Rice | cytosol | 85.03 | 84.55 |
| CDX74573 | Canola | cytosol | 84.75 | 84.27 |
| KXG30808 | Sorghum | cytosol | 84.75 | 84.27 |
| CDY16439 | Canola | cytosol | 84.46 | 83.99 |
| CDY01727 | Canola | cytosol | 82.77 | 83.95 |
| Zm00001d051804_P001 | Maize | cytosol, extracellular, mitochondrion, plasma membrane | 84.18 | 83.71 |
| VIT_01s0011g02200.t01 | Wine grape | cytosol | 84.18 | 83.71 |
| TraesCS6A01G298100.2 | Wheat | cytosol | 84.18 | 83.71 |
| TraesCS6B01G327500.1 | Wheat | cytosol, golgi, plastid, unclear | 83.9 | 83.43 |
| CDY52941 | Canola | cytosol | 83.9 | 83.43 |
| CDY38104 | Canola | cytosol | 82.77 | 82.3 |
| CDY49656 | Canola | cytosol | 82.77 | 82.3 |
| CDY49672 | Canola | cytosol | 82.77 | 82.07 |
| CDX93671 | Canola | cytosol | 82.77 | 82.07 |
| CDX85499 | Canola | cytosol | 82.49 | 82.02 |
| CDX69442 | Canola | cytosol | 81.92 | 81.46 |
| Zm00001d017958_P002 | Maize | cytosol | 82.49 | 79.35 |
| HORVU6Hr1G074030.2 | Barley | cytosol, mitochondrion, plastid | 84.18 | 73.4 |
| Solyc12g041870.1.1 | Tomato | cytosol | 72.6 | 71.59 |
| CDY27610 | Canola | cytosol | 38.42 | 65.07 |
| CDY49365 | Canola | plastid | 71.47 | 64.21 |
| CDX74644 | Canola | plastid | 75.42 | 62.38 |
| CDY27650 | Canola | mitochondrion | 29.66 | 62.13 |
| CDX84116 | Canola | plastid | 43.22 | 61.94 |
| CDY33684 | Canola | plastid | 75.42 | 54.6 |
| CDX98429 | Canola | plastid | 24.01 | 40.48 |
Protein Annotations
| KEGG:00220+6.3.1.2 | KEGG:00250+6.3.1.2 | KEGG:00630+6.3.1.2 | KEGG:00910+6.3.1.2 | MapMan:25.1.5.1.1 | Gene3D:3.10.20.70 |
| Gene3D:3.30.590.40 | GO:A0A078JMZ9 | UniProt:A0A078JMZ9 | EnsemblPlants:CDY68179 | ProteinID:CDY68179 | ProteinID:CDY68179.1 |
| ProteinID:CDY68590.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004356 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0006542 | GO:GO:0006807 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016874 | EnsemblPlantsGene:GSBRNA2T00070026001 | InterPro:Gln_synt_N | InterPro:Gln_synt_b-grasp | InterPro:Gln_synth/guanido_kin_cat_dom |
| InterPro:Gln_synth_N_conserv_site | InterPro:Gln_synth_cat_dom | InterPro:Gln_synth_gly_rich_site | InterPro:IPR036651 | PFAM:PF00120 | PFAM:PF03951 |
| ScanProsite:PS00180 | ScanProsite:PS00181 | PANTHER:PTHR20852 | PANTHER:PTHR20852:SF59 | MetaCyc:PWY-381 | MetaCyc:PWY-5675 |
| MetaCyc:PWY-6549 | MetaCyc:PWY-6963 | MetaCyc:PWY-6964 | SMART:SM01230 | SUPFAM:SSF54368 | SUPFAM:SSF55931 |
| UniParc:UPI0004EF4A97 | SEG:seg | : | : | : | : |
Description
BnaCnng57900DGlutamine synthetase [Source:UniProtKB/TrEMBL;Acc:A0A078JMZ9]
Coordinates
chrLK036943:+:1340..3609
Molecular Weight (calculated)
38573.7 Da
IEP (calculated)
7.112
GRAVY (calculated)
-0.388
Length
354 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLLSDLVNL NLSDTTKQII AEYIWIGGSG MDIRSKARTL PGPVTDPSKL PKWNYDGSST GQAAGDDSEV ILYPQAIFRD PFRRGNNILV MCDAYTPAGN
101: PIPTNKRHNA AKIFSNSKVA SEEPWYGIEQ EYTLMQKGVN WPIGWPVGGF PGPQGPYYCG VGADKAIGRD IVDAHYKACL YAGISISGVN GEVMPGQWEF
201: QVGPVEGISA GDQVWIARFL LERITEISGV NVSFDPKPVP GDWNGAGAHC NYSTKTMRNT GGLAVIKKAI EKLQVKHKQH IAAYGEGNER RLTGKHETAD
301: INTFSWGVAN RGASVRVGRD TEKEGKGYFE DRRPASNMDP YVVTSMIAET TILG
101: PIPTNKRHNA AKIFSNSKVA SEEPWYGIEQ EYTLMQKGVN WPIGWPVGGF PGPQGPYYCG VGADKAIGRD IVDAHYKACL YAGISISGVN GEVMPGQWEF
201: QVGPVEGISA GDQVWIARFL LERITEISGV NVSFDPKPVP GDWNGAGAHC NYSTKTMRNT GGLAVIKKAI EKLQVKHKQH IAAYGEGNER RLTGKHETAD
301: INTFSWGVAN RGASVRVGRD TEKEGKGYFE DRRPASNMDP YVVTSMIAET TILG
001: MSLLSDLVNL NLTDATGKII AEYIWIGGSG MDIRSKARTL PGPVTDPSKL PKWNYDGSST GQAAGEDSEV ILYPQAIFKD PFRKGNNILV MCDAYTPAGD
101: PIPTNKRHNA AKIFSHPDVA KEEPWYGIEQ EYTLMQKDVN WPIGWPVGGY PGPQGPYYCG VGADKAIGRD IVDAHYKACL YAGIGISGIN GEVMPGQWEF
201: QVGPVEGISS GDQVWVARYL LERITEISGV IVSFDPKPVP GDWNGAGAHC NYSTKTMRND GGLEVIKKAI GKLQLKHKEH IAAYGEGNER RLTGKHETAD
301: INTFSWGVAN RGASVRVGRD TEKEGKGYFE DRRPASNMDP YVVTSMIAET TILG
101: PIPTNKRHNA AKIFSHPDVA KEEPWYGIEQ EYTLMQKDVN WPIGWPVGGY PGPQGPYYCG VGADKAIGRD IVDAHYKACL YAGIGISGIN GEVMPGQWEF
201: QVGPVEGISS GDQVWVARYL LERITEISGV IVSFDPKPVP GDWNGAGAHC NYSTKTMRND GGLEVIKKAI GKLQLKHKEH IAAYGEGNER RLTGKHETAD
301: INTFSWGVAN RGASVRVGRD TEKEGKGYFE DRRPASNMDP YVVTSMIAET TILG
Arabidopsis Description
GLN1-3Glutamine synthetase [Source:UniProtKB/TrEMBL;Acc:A0A178VNQ6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.