CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051804_P001	Maize	cytosol, extracellular, mitochondrion, plasma membrane	95.79	95.79
Os02t0735200-02	Rice	cytosol	94.94	94.94
Zm00001d017958_P002	Maize	cytosol	94.94	91.85
TraesCS6A01G298100.2	Wheat	cytosol	91.01	91.01
TraesCS6B01G327500.1	Wheat	cytosol, golgi, plastid, unclear	90.73	90.73
KRH48674	Soybean	endoplasmic reticulum	89.04	89.04
VIT_01s0011g02200.t01	Wine grape	cytosol	88.76	88.76
KRH39031	Soybean	cytosol, nucleus	88.48	88.48
OQU92979	Sorghum	cytosol	87.08	86.83
AT3G17820.1	Thale cress	cytosol	85.96	86.44
CDX95818	Canola	cytosol	85.67	86.16
Bra022247.1-P	Field mustard	cytosol	85.67	86.16
CDX92165	Canola	cytosol	85.67	86.16
CDY68179	Canola	cytosol	84.27	84.75
CDY68590	Canola	cytosol	84.27	84.75
Bra021276.1-P	Field mustard	cytosol	83.99	84.46
OQU91109	Sorghum	cytosol	85.39	82.83
CDX75942	Canola	cytosol	80.9	81.13
HORVU6Hr1G074030.2	Barley	cytosol, mitochondrion, plastid	91.85	80.54
CDX82343	Canola	cytosol	80.06	80.28
AT1G48470.1	Thale cress	cytosol	78.93	79.6
Bra018729.1-P	Field mustard	cytosol	78.65	79.55
CDY49672	Canola	cytosol	78.65	78.43
CDX93671	Canola	cytosol	78.65	78.43
PGSC0003DMT400037457	Potato	cytosol, plastid	70.22	78.37
Bra001686.1-P	Field mustard	endoplasmic reticulum, golgi	77.25	77.68
Solyc12g041870.1.1	Tomato	cytosol	76.4	75.77
KXG27313	Sorghum	plastid	78.09	64.2
Bra032257.1-P	Field mustard	cytosol	28.65	60.0
PGSC0003DMT400036605	Potato	cytosol	14.61	59.09
CDY27610	Canola	cytosol	33.71	57.42
CDY27650	Canola	mitochondrion	25.84	54.44
CDX98429	Canola	plastid	22.47	38.1

Protein Annotations

KEGG:00220+6.3.1.2	KEGG:00250+6.3.1.2	KEGG:00630+6.3.1.2	KEGG:00910+6.3.1.2	MapMan:25.1.5.1.1	Gene3D:3.10.20.70
Gene3D:3.30.590.40	UniProt:A0A194YRE9	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004356
GO:GO:0005488	GO:GO:0005524	GO:GO:0006542	GO:GO:0006807	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016874	InterPro:Gln_synt_N	InterPro:Gln_synt_b-grasp	InterPro:Gln_synth/guanido_kin_cat_dom
InterPro:Gln_synth_N_conserv_site	InterPro:Gln_synth_cat_dom	InterPro:Gln_synth_gly_rich_site	InterPro:IPR036651	EnsemblPlants:KXG30808	ProteinID:KXG30808
ProteinID:KXG30808.1	PFAM:PF00120	PFAM:PF03951	ScanProsite:PS00180	ScanProsite:PS00181	PANTHER:PTHR20852
PANTHER:PTHR20852:SF59	MetaCyc:PWY-381	MetaCyc:PWY-5675	MetaCyc:PWY-6549	MetaCyc:PWY-6963	MetaCyc:PWY-6964
SMART:SM01230	EnsemblPlantsGene:SORBI_3004G247000	SUPFAM:SSF54368	SUPFAM:SSF55931	UniParc:UPI0001C80D6B	SEG:seg

Description

hypothetical protein

Coordinates

chr4:+:59472640..59476805

Molecular Weight (calculated)

39185.1 Da

IEP (calculated)

5.465

GRAVY (calculated)

-0.452

Length

356 amino acids

Sequence
(BLAST)

001: MASLTDLVNL SLSDTTEKII AEYIWIGGSG MDLRSKARTL SGPVTDPSKL PKWNYDGSST GQAPGEDSEV ILYPQAIFKD PFRRGNNILV MCDCYTPAGE
101: PIPTNKRHNA AKIFSNPEVA AEEPWYGIEQ EYTLLQKDTN WPLGWPLGGF PGPQGPYYCG IGADKSFGRD IVDAHYKACI YAGINISGIN GEVMPGQWEF
201: QVGPSVGISS GDQVWVARYI LERITEIAGV VLTFDPKPIP GDWNGAGAHT NYSTKSMRNE GGYEVIKAAI EKLKLRHKEH IAAYGEGNER RLTGRHETAD
301: INTFSWGVAN RGASVRVGRE TEQNGKGYFE DRRPASNMDP YVVTSMIADT TILWKP

Best Arabidopsis Sequence Match ( AT1G66200.1 )
(BLAST)

001: MSLLADLVNL DISDNSEKII AEYIWVGGSG MDMRSKARTL PGPVTDPSKL PKWNYDGSST GQAPGQDSEV ILYPQAIFKD PFRRGNNILV MCDAYTPAGE
101: PIPTNKRHAA AEIFANPDVI AEVPWYGIEQ EYTLLQKDVN WPLGWPIGGF PGPQGPYYCS IGADKSFGRD IVDAHYKASL YAGINISGIN GEVMPGQWEF
201: QVGPSVGISA ADEIWIARYI LERITEIAGV VVSFDPKPIP GDWNGAGAHT NYSTKSMREE GGYEIIKKAI EKLGLRHKEH ISAYGEGNER RLTGHHETAD
301: INTFLWGVAN RGASIRVGRD TEKEGKGYFE DRRPASNMDP YVVTSMIAET TLLWNP

Arabidopsis Description

ATGSR2Glutamine synthetase [Source:UniProtKB/TrEMBL;Acc:F4ID91]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.