Factsheet for Bra032257.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra018729.1-P	Field mustard	cytosol	75.88	36.65
VIT_01s0011g02200.t01	Wine grape	cytosol	64.71	30.9
Bra022247.1-P	Field mustard	cytosol	63.53	30.51
Bra001686.1-P	Field mustard	endoplasmic reticulum, golgi	62.35	29.94
Bra023573.1-P	Field mustard	cytosol	61.76	29.49
Bra039756.1-P	Field mustard	cytosol	61.76	29.49
Os02t0735200-02	Rice	cytosol	61.76	29.49
Bra021276.1-P	Field mustard	cytosol	61.18	29.38
Bra008612.1-P	Field mustard	cytosol	61.18	29.21
Bra028132.1-P	Field mustard	cytosol	61.18	29.21
Zm00001d051804_P001	Maize	cytosol, extracellular, mitochondrion, plasma membrane	60.59	28.93
TraesCS6B01G327500.1	Wheat	cytosol, golgi, plastid, unclear	60.59	28.93
TraesCS6A01G298100.2	Wheat	cytosol	60.59	28.93
KXG30808	Sorghum	cytosol	60.0	28.65
Zm00001d017958_P002	Maize	cytosol	60.59	27.99
Solyc12g041870.1.1	Tomato	cytosol	57.65	27.3
HORVU6Hr1G074030.2	Barley	cytosol, mitochondrion, plastid	60.59	25.37
Bra035529.1-P	Field mustard	plastid	58.24	23.13
Bra035392.1-P	Field mustard	plastid	57.65	22.9
PGSC0003DMT400036605	Potato	cytosol	1.18	2.27

Protein Annotations

KEGG:00220+6.3.1.2	KEGG:00250+6.3.1.2	KEGG:00630+6.3.1.2	KEGG:00910+6.3.1.2	Gene3D:3.30.590.40	MapMan:35.1
EnsemblPlantsGene:Bra032257	EnsemblPlants:Bra032257.1	EnsemblPlants:Bra032257.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004356
GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	InterPro:Gln_synth/guanido_kin_cat_dom	InterPro:Gln_synth_cat_dom	InterPro:Gln_synth_gly_rich_site
UniProt:M4ETX5	PFAM:PF00120	ScanProsite:PS00181	PANTHER:PTHR20852	PANTHER:PTHR20852:SF58	SMART:SM01230
SUPFAM:SSF55931	UniParc:UPI0002547CAA	:	:	:	:

Description

AT1G48470 (E=1e-062) GLN1;5 | GLN1;5 (glutamine synthetase 1;5); glutamate-ammonia ligase

Coordinates

chrA05:-:12237462..12238197

Molecular Weight (calculated)

18520.4 Da

IEP (calculated)

8.442

GRAVY (calculated)

-0.204

Length

170 amino acids

Sequence
(BLAST)

001: MLEVMPGQWE FQISPTVGIG AGDQLWVARY ILERITEICG VIVSFDPKPI EGDWNGAAAH TNFSTKSMRK GGLDLIKKSI GKLEVSINNT LQLMVKATRG
101: VSPGTMKPQT STNSLGYEIK LIRVADRGAS VRVGRDTEKE GKGYFEDGRP SSNMDPYLVT SIIAETTILG

Best Arabidopsis Sequence Match ( AT1G48470.1 )
(BLAST)

001: MTSPLSDLLN LDLSDTKKII AEYIWIGGSG MDIRSKARTL PGPVSNPTKL PKWNYDGSST DQAAGDDSEV ILYPQAIFKD PFRKGNNILV MCDAYRPAGD
101: PIPTNNRHKA VKIFDHPNVK AEEPWFGIEQ EYTLLKKDVK WPLGWPLGGF PGPQGPYYCA VGADKAFGRD IVDAHYKACL YSGLSIGGAN GEVMPGQWEF
201: QISPTVGIGA GDQLWVARYI LERITEICGV IVSFDPKPIQ GDWNGAAAHT NFSTKSMRKD GGLDLIKEAI KKLEVKHKQH IAAYGEGNER RLTGKHETAD
301: INTFSWGVAD RGASVRVGRD TEKEGKGYFE DRRPSSNMDP YLVTSMIAET TIL

Arabidopsis Description

GLN1-5Glutamine synthetase cytosolic isozyme 1-5 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXW5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.