Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G327500.1 | Wheat | cytosol, golgi, plastid, unclear | 99.72 | 99.72 |
| Zm00001d051804_P001 | Maize | cytosol, extracellular, mitochondrion, plasma membrane | 91.57 | 91.57 |
| Os02t0735200-02 | Rice | cytosol | 91.29 | 91.29 |
| KXG30808 | Sorghum | cytosol | 91.01 | 91.01 |
| Zm00001d017958_P002 | Maize | cytosol | 90.45 | 87.5 |
| AT3G17820.1 | Thale cress | cytosol | 86.8 | 87.29 |
| VIT_01s0011g02200.t01 | Wine grape | cytosol | 86.24 | 86.24 |
| CDX92165 | Canola | cytosol | 85.67 | 86.16 |
| CDX95818 | Canola | cytosol | 85.67 | 86.16 |
| Bra022247.1-P | Field mustard | cytosol | 85.67 | 86.16 |
| HORVU6Hr1G074030.2 | Barley | cytosol, mitochondrion, plastid | 98.03 | 85.96 |
| KRH48674 | Soybean | endoplasmic reticulum | 85.96 | 85.96 |
| KRH39031 | Soybean | cytosol, nucleus | 85.39 | 85.39 |
| CDY68179 | Canola | cytosol | 83.71 | 84.18 |
| CDY68590 | Canola | cytosol | 83.71 | 84.18 |
| Bra021276.1-P | Field mustard | cytosol | 83.43 | 83.9 |
| TraesCS4A01G063800.1 | Wheat | cytosol | 81.46 | 81.92 |
| CDX75942 | Canola | cytosol | 80.62 | 80.85 |
| AT1G48470.1 | Thale cress | cytosol | 80.06 | 80.74 |
| Bra018729.1-P | Field mustard | cytosol | 79.21 | 80.11 |
| CDX82343 | Canola | cytosol | 79.49 | 79.72 |
| CDY49672 | Canola | cytosol | 79.21 | 78.99 |
| CDX93671 | Canola | cytosol | 79.21 | 78.99 |
| TraesCS4A01G266900.1 | Wheat | cytosol | 80.06 | 78.73 |
| PGSC0003DMT400037457 | Potato | cytosol, plastid | 69.38 | 77.43 |
| Bra001686.1-P | Field mustard | endoplasmic reticulum, golgi | 76.97 | 77.4 |
| Solyc12g041870.1.1 | Tomato | cytosol | 75.0 | 74.37 |
| TraesCS2A01G500400.1 | Wheat | plastid | 76.12 | 63.47 |
| Bra032257.1-P | Field mustard | cytosol | 28.93 | 60.59 |
| PGSC0003DMT400036605 | Potato | cytosol | 14.33 | 57.95 |
| CDY27610 | Canola | cytosol | 33.15 | 56.46 |
| CDY27650 | Canola | mitochondrion | 25.0 | 52.66 |
| CDX98429 | Canola | plastid | 21.07 | 35.71 |
Protein Annotations
| KEGG:00220+6.3.1.2 | KEGG:00250+6.3.1.2 | KEGG:00630+6.3.1.2 | KEGG:00910+6.3.1.2 | MapMan:25.1.5.1.1 | Gene3D:3.10.20.70 |
| Gene3D:3.30.590.40 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004356 | GO:GO:0006542 | GO:GO:0006807 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:Gln_synt_N | InterPro:Gln_synt_b-grasp |
| InterPro:Gln_synth/guanido_kin_cat_dom | InterPro:Gln_synth_N_conserv_site | InterPro:Gln_synth_cat_dom | InterPro:Gln_synth_gly_rich_site | InterPro:IPR036651 | PFAM:PF00120 |
| PFAM:PF03951 | ScanProsite:PS00180 | ScanProsite:PS00181 | PANTHER:PTHR20852 | PANTHER:PTHR20852:SF59 | SMART:SM01230 |
| SUPFAM:SSF54368 | SUPFAM:SSF55931 | EnsemblPlantsGene:TraesCS6A01G298100 | EnsemblPlants:TraesCS6A01G298100.2 | SEG:seg | : |
Description
No Description!
Coordinates
chr6A:-:531394751..531398161
Molecular Weight (calculated)
39199.4 Da
IEP (calculated)
5.276
GRAVY (calculated)
-0.387
Length
356 amino acids
Sequence
(BLAST)
(BLAST)
001: MALLTDLLNL DLTDSTEKII AEYIWIGGSG MDLRSKARTL PGPVTDPSKL PKWNYDGSST GQAPGEDSEV ILYPQAIFKD PFRKGNNILV MCDCYTPAGV
101: PIPTNKRYNA AKIFSNPDVA KEEPWYGIEQ EYTLLQKDIN WPLGWPVGGF PGPQGPYYCS IGADKSFGRD IVDAHYKACL FAGVNISGIN GEVMPGQWEF
201: QVGPTVGISA GDQVWVARYL LERITEIAGV VVTFDPKPIP GDWNGAGAHT NYSTESMRKD GGFKVIVDAV EKLKLKHKEH IAAYGEGNER RLTGKHETAD
301: INTFSWGVAN RGASVRVGRE TEQNGKGYFE DRRPASNMDP YVVTSMIAET TILWKP
101: PIPTNKRYNA AKIFSNPDVA KEEPWYGIEQ EYTLLQKDIN WPLGWPVGGF PGPQGPYYCS IGADKSFGRD IVDAHYKACL FAGVNISGIN GEVMPGQWEF
201: QVGPTVGISA GDQVWVARYL LERITEIAGV VVTFDPKPIP GDWNGAGAHT NYSTESMRKD GGFKVIVDAV EKLKLKHKEH IAAYGEGNER RLTGKHETAD
301: INTFSWGVAN RGASVRVGRE TEQNGKGYFE DRRPASNMDP YVVTSMIAET TILWKP
001: MSLLADLVNL DISDNSEKII AEYIWVGGSG MDMRSKARTL PGPVTDPSKL PKWNYDGSST GQAPGQDSEV ILYPQAIFKD PFRRGNNILV MCDAYTPAGE
101: PIPTNKRHAA AEIFANPDVI AEVPWYGIEQ EYTLLQKDVN WPLGWPIGGF PGPQGPYYCS IGADKSFGRD IVDAHYKASL YAGINISGIN GEVMPGQWEF
201: QVGPSVGISA ADEIWIARYI LERITEIAGV VVSFDPKPIP GDWNGAGAHT NYSTKSMREE GGYEIIKKAI EKLGLRHKEH ISAYGEGNER RLTGHHETAD
301: INTFLWGVAN RGASIRVGRD TEKEGKGYFE DRRPASNMDP YVVTSMIAET TLLWNP
101: PIPTNKRHAA AEIFANPDVI AEVPWYGIEQ EYTLLQKDVN WPLGWPIGGF PGPQGPYYCS IGADKSFGRD IVDAHYKASL YAGINISGIN GEVMPGQWEF
201: QVGPSVGISA ADEIWIARYI LERITEIAGV VVSFDPKPIP GDWNGAGAHT NYSTKSMREE GGYEIIKKAI EKLGLRHKEH ISAYGEGNER RLTGHHETAD
301: INTFLWGVAN RGASIRVGRD TEKEGKGYFE DRRPASNMDP YVVTSMIAET TLLWNP
Arabidopsis Description
ATGSR2Glutamine synthetase [Source:UniProtKB/TrEMBL;Acc:F4ID91]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.