CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27650	Canola	mitochondrion	56.46	69.82
CDX92165	Canola	cytosol	65.55	38.7
CDX95818	Canola	cytosol	65.55	38.7
CDY68590	Canola	cytosol	65.07	38.42
CDY68179	Canola	cytosol	65.07	38.42
AT3G17820.1	Thale cress	cytosol	62.68	37.01
CDX82343	Canola	cytosol	61.72	36.34
CDX75942	Canola	cytosol	61.24	36.06
CDX85499	Canola	cytosol	57.89	33.99
CDY49656	Canola	cytosol	57.89	33.99
CDY38104	Canola	cytosol	57.89	33.99
Os02t0735200-02	Rice	cytosol	57.42	33.71
KXG30808	Sorghum	cytosol	57.42	33.71
CDX84116	Canola	plastid	39.71	33.6
CDX69442	Canola	cytosol	56.46	33.15
TraesCS6A01G298100.2	Wheat	cytosol	56.46	33.15
TraesCS6B01G327500.1	Wheat	cytosol, golgi, plastid, unclear	55.98	32.87
VIT_01s0011g02200.t01	Wine grape	cytosol	55.98	32.87
Zm00001d051804_P001	Maize	cytosol, extracellular, mitochondrion, plasma membrane	55.98	32.87
Zm00001d017958_P002	Maize	cytosol	56.94	32.34
CDY52941	Canola	cytosol	55.02	32.3
CDX74573	Canola	cytosol	55.02	32.3
CDY16439	Canola	cytosol	54.55	32.02
CDY01727	Canola	cytosol	53.11	31.81
Solyc12g041870.1.1	Tomato	cytosol	52.63	30.64
CDY49672	Canola	cytosol	51.67	30.25
CDX93671	Canola	cytosol	51.67	30.25
HORVU6Hr1G074030.2	Barley	cytosol, mitochondrion, plastid	55.98	28.82
CDX98429	Canola	plastid	28.23	28.1
CDY49365	Canola	plastid	52.63	27.92
CDX74644	Canola	plastid	53.11	25.93
CDY33684	Canola	plastid	53.11	22.7

Protein Annotations

KEGG:00220+6.3.1.2	KEGG:00250+6.3.1.2	KEGG:00630+6.3.1.2	KEGG:00910+6.3.1.2	Gene3D:3.30.590.40	MapMan:35.1
GO:A0A078GM29	UniProt:A0A078GM29	EnsemblPlants:CDY27610	ProteinID:CDY27610	ProteinID:CDY27610.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004356	GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	EnsemblPlantsGene:GSBRNA2T00038355001
InterPro:Gln_synth/guanido_kin_cat_dom	InterPro:Gln_synth_cat_dom	PANTHER:PTHR20852	PANTHER:PTHR20852:SF59	MetaCyc:PWY-381	MetaCyc:PWY-5675
MetaCyc:PWY-6549	MetaCyc:PWY-6963	MetaCyc:PWY-6964	SMART:SM01230	SUPFAM:SSF55931	UniParc:UPI0004EE0655

Description

BnaA09g27970DBnaA09g27970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GM29]

Coordinates

chrLK032207:-:287846..291710

Molecular Weight (calculated)

23169.2 Da

IEP (calculated)

8.177

GRAVY (calculated)

-0.076

Length

209 amino acids

Sequence
(BLAST)

001: MSCMIQSTKF VHGPSCVLKK QLRIPPTAFF YYVSPDLYFI MNSGNNILVM CDAYTPAGNP IPTNKKHNAA KIFSNSKVAS EEPWYGIEEE YTLMQKGGPY
101: YCGVGADKAI GRDIMDAHYK ACLYAGIGIS GVNGEVMPGQ WEFQVGPVEG ISAGDQVWVA RYLLGLRPKT SPGYIFENVY LMVIKMNSGT MKMVTHEIPP
201: KYTNFGFSI

Best Arabidopsis Sequence Match ( AT1G66200.2 )
(BLAST)

001: MSLLADLVNL DISDNSEKII AEYIWVGGSG MDMRSKARTL PGPVTDPSKL PKWNYDGSST GQAPGQDSEV ILYPQAIFKD PFRRGNNILV MCDAYTPAGE
101: PIPTNKRHAA AEIFANPDVI AEVPWYGIEQ EYTLLQKDVN WPLGWPIGGF PGPQGPYYCS IGADKSFGRD IVDAHYKASL YAGINISGIN GEVMPGQWEF
201: QVGPSVGISA ADEIWIARYI LERITEIAGV VVSFDPKPIP GDWNGAGAHT NYRDTLRIGG QLQTWTLTLL LP

Arabidopsis Description

ATGSR2Glutamine synthetase [Source:UniProtKB/TrEMBL;Acc:F4ID91]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.