Factsheet for Os02t0735200-02

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG30808	Sorghum	cytosol	94.94	94.94
Zm00001d051804_P001	Maize	cytosol, extracellular, mitochondrion, plasma membrane	94.1	94.1
TraesCS6B01G327500.1	Wheat	cytosol, golgi, plastid, unclear	91.57	91.57
TraesCS6A01G298100.2	Wheat	cytosol	91.29	91.29
Zm00001d017958_P002	Maize	cytosol	93.54	90.49
VIT_01s0011g02200.t01	Wine grape	cytosol	89.61	89.61
KRH48674	Soybean	endoplasmic reticulum	87.64	87.64
KRH39031	Soybean	cytosol, nucleus	87.08	87.08
AT3G17820.1	Thale cress	cytosol	86.52	87.01
CDX92165	Canola	cytosol	85.96	86.44
CDX95818	Canola	cytosol	85.96	86.44
Bra022247.1-P	Field mustard	cytosol	85.96	86.44
Os03t0223400-01	Rice	cytosol, plasma membrane	85.67	85.43
CDY68179	Canola	cytosol	84.55	85.03
CDY68590	Canola	cytosol	84.55	85.03
Bra021276.1-P	Field mustard	cytosol	84.27	84.75
HORVU6Hr1G074030.2	Barley	cytosol, mitochondrion, plastid	92.7	81.28
CDX75942	Canola	cytosol	80.62	80.85
Os03t0712800-02	Rice	cytosol, plastid	83.71	80.54
AT1G48470.1	Thale cress	cytosol	79.49	80.17
Bra018729.1-P	Field mustard	cytosol	79.21	80.11
CDX82343	Canola	cytosol	79.49	79.72
PGSC0003DMT400037457	Potato	cytosol, plastid	71.35	79.62
CDX93671	Canola	cytosol	79.21	78.99
CDY49672	Canola	cytosol	79.21	78.99
Bra001686.1-P	Field mustard	endoplasmic reticulum, golgi	76.69	77.12
Solyc12g041870.1.1	Tomato	cytosol	77.25	76.6
Os04t0659100-01	Rice	plastid	78.09	64.95
Bra032257.1-P	Field mustard	cytosol	29.49	61.76
PGSC0003DMT400036605	Potato	cytosol	14.89	60.23
CDY27610	Canola	cytosol	33.71	57.42
CDY27650	Canola	mitochondrion	25.84	54.44
CDX98429	Canola	plastid	23.31	39.52

Protein Annotations

KEGG:00220+6.3.1.2	KEGG:00250+6.3.1.2	KEGG:00630+6.3.1.2	KEGG:00910+6.3.1.2	MapMan:25.1.5.1.1	Gene3D:3.10.20.70
Gene3D:3.30.590.40	EntrezGene:4330649	EMBL:AB037595	EMBL:AK061157	EMBL:AK104987	ProteinID:BAA95678.1
ProteinID:BAD15892.1	ProteinID:BAF09959.1	ProteinID:BAS80796.1	ProteinID:EAZ24534.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004356	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006542	GO:GO:0006807	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016874	InterPro:Gln_synt_N	InterPro:Gln_synt_b-grasp	InterPro:Gln_synth/guanido_kin_cat_dom
InterPro:Gln_synth_N_conserv_site	InterPro:Gln_synth_cat_dom	InterPro:Gln_synth_gly_rich_site	InterPro:IPR036651	EnsemblPlantsGene:Os02g0735200	EnsemblPlants:Os02t0735200-02
UniProt:P14656	PFAM:PF00120	PFAM:PF03951	ScanProsite:PS00180	ScanProsite:PS00181	PANTHER:PTHR20852
PANTHER:PTHR20852:SF59	SMART:SM01230	SUPFAM:SSF54368	SUPFAM:SSF55931	UniParc:UPI000012B6C2	EMBL:X14245
RefSeq:XP_015626102.1	:	:	:	:	:

Description

GLUTAMINE SYNTHETASE 1;1Glutamine synthetase shoot isozyme (EC 6.3.1.2) (Glutamate--ammonia ligase) (Clone lambda-GS28). (Os02t0735200-01);Glutamine synthetase shoot isozyme (EC 6.3.1.2) (Glutamate--ammonia ligase) (Clone lambda-GS28). (Os02t0735200-02);Glutamine synthetase shoot isozyme (EC 6.3.1.2) (Glutamate--ammonia ligase) (Clone lambda-GS28). (Os02t0735200-03)

Coordinates

chr2:-:30674780..30678475

Molecular Weight (calculated)

39203.2 Da

IEP (calculated)

5.465

GRAVY (calculated)

-0.454

Length

356 amino acids

Sequence
(BLAST)

001: MASLTDLVNL NLSDTTEKII AEYIWIGGSG MDLRSKARTL SGPVTDPSKL PKWNYDGSST GQAPGEDSEV ILYPQAIFKD PFRKGNNILV MCDCYTPAGE
101: PIPTNKRHNA AKIFSSPEVA SEEPWYGIEQ EYTLLQKDIN WPLGWPVGGF PGPQGPYYCG IGADKSFGRD IVDSHYKACL YAGINISGIN GEVMPGQWEF
201: QVGPSVGISA GDQVWVARYI LERITEIAGV VVSFDPKPIP GDWNGAGAHT NYSTKSMRND GGYEIIKSAI EKLKLRHKEH ISAYGEGNER RLTGRHETAD
301: INTFSWGVAN RGASVRVGRE TEQNGKGYFE DRRPASNMDP YIVTSMIAET TIIWKP

Best Arabidopsis Sequence Match ( AT5G37600.1 )
(BLAST)

001: MSLVSDLINL NLSDSTDKII AEYIWVGGSG MDMRSKARTL PGPVTDPSQL PKWNYDGSST GQAPGEDSEV ILYPQAIFKD PFRRGNNILV MCDAYTPAGE
101: PIPTNKRHAA AKVFSNPDVA AEVPWYGIEQ EYTLLQKDVK WPVGWPIGGY PGPQGPYYCG IGADKSFGRD VVDSHYKACL YAGINISGIN GEVMPGQWEF
201: QVGPAVGISA ADEIWVARYI LERITEIAGV VVSFDPKPIP GDWNGAGAHC NYSTKSMREE GGYEIIKKAI DKLGLRHKEH IAAYGEGNER RLTGHHETAD
301: INTFLWGVAN RGASIRVGRD TEKEGKGYFE DRRPASNMDP YIVTSMIAET TILWNP

Arabidopsis Description

GLN1-1Glutamine synthetase cytosolic isozyme 1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q56WN1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.