Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- cytosol 1
- mitochondrion 2
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
plastid:
23257241
|
plastid:
17189339
extracellular: 23159799 plastid: 27126603 plasma membrane: 27800704 extracellular: 28232208 |
gfp PMID:
23257241
doi
Australian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Crawley, Western Australia 6009, Australia.
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID:
23159799
doi
Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju, 660-701, South Korea.
msms PMID:
17189339
doi
Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.
msms PMID:
27126603
doi
Key Laboratory of Research and Development for Resource Plant, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Research and Development for Resource Plant, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China. Electronic address: chenh@ibcas.ac.cn., Key Laboratory of Research and Development for Resource Plant, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China; University of Chinese Academy of Sciences, Beijing 100049, China.
msms PMID:
28232208
doi
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS2D01G500600.1 | Wheat | plastid | 90.65 | 90.87 |
TraesCS2A01G500400.1 | Wheat | plastid | 90.65 | 90.87 |
TraesCS2B01G528300.1 | Wheat | plastid | 89.72 | 90.78 |
KXG27313 | Sorghum | plastid | 91.59 | 90.53 |
GSMUA_Achr9P17480_001 | Banana | cytosol | 73.36 | 88.2 |
GSMUA_Achr3P09120_001 | Banana | mitochondrion | 78.97 | 83.66 |
PGSC0003DMT400011133 | Potato | cytosol | 81.31 | 80.56 |
VIT_07s0104g00610.t01 | Wine grape | plastid | 81.31 | 80.37 |
VIT_05s0020g02480.t01 | Wine grape | plastid | 80.37 | 79.63 |
Solyc01g080280.2.1 | Tomato | plastid | 80.37 | 79.63 |
Bra035392.1-P | Field mustard | plastid | 78.74 | 78.74 |
CDX74644 | Canola | plastid | 78.74 | 78.74 |
Bra035529.1-P | Field mustard | plastid | 78.27 | 78.27 |
Os02t0735200-02 | Rice | cytosol | 64.95 | 78.09 |
AT5G35630.1 | Thale cress | plastid | 78.04 | 77.67 |
CDY49365 | Canola | plastid | 71.5 | 77.67 |
Os03t0223400-01 | Rice | cytosol, plasma membrane | 64.72 | 77.59 |
Os03t0712800-02 | Rice | cytosol, plastid | 62.38 | 72.16 |
CDX84116 | Canola | plastid | 40.65 | 70.45 |
CDY33684 | Canola | plastid | 78.74 | 68.92 |
KRH25519 | Soybean | plastid | 21.73 | 48.95 |
PGSC0003DMT400045640 | Potato | cytosol, plastid | 15.19 | 30.95 |
Protein Annotations
Description
GRAIN SIZE 2Glutamine synthetase shoot isozyme, chloroplast precursor (EC 6.3.1.2) (Glutamate--ammonia ligase) (Clone lambda-GS31). (Os04t0659100-01);Similar to Isoform 2 of Glutamine synthetase, chloroplastic. (Os04t0659100-02);Glutamine synthetase shoot isozyme, chloroplast precursor (EC 6.3.1.2) (Glutamate--ammonia ligase) (Clone lambda-GS31). (Os04t0659100-03)
Coordinates
chr4:-:33624428..33631025
Molecular Weight (calculated)
46645.3 Da
IEP (calculated)
6.271
GRAVY (calculated)
-0.313
Length
428 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQAVVPAMQ CQVGAVRARP AAAAAAAGGR VWGVRRTGRG TSGFRVMAVS TETTGVVTRM EQLLNMDTTP FTDKIIAEYI WVGGTGIDLR SKSRTISKPV
101: EDPSELPKWN YDGSSTGQAP GEDSEVILYP QAIFKDPFRG GNNILVMCDT YTPAGEPIPT NKRNRAAQVF SDPKVVSQVP WFGIEQEYTL LQRDVNWPLG
201: WPVGGYPGPQ GPYYCAVGSD KSFGRDISDA HYKACLYAGI NISGTNGEVM PGQWEYQVGP SVGIEAGDHI WISRYILERI TEQAGVVLTL DPKPIQGDWN
301: GAGCHTNYST KSMREDGGFE VIKKAILNLS LRHDLHISAY GEGNERRLTG LHETASIDNF SWGVANRGCS IRVGRDTEAK GKGYLEDRRP ASNMDPYVVT
401: ALLAETTILW EPTLEAEVLA AKKLALKV
101: EDPSELPKWN YDGSSTGQAP GEDSEVILYP QAIFKDPFRG GNNILVMCDT YTPAGEPIPT NKRNRAAQVF SDPKVVSQVP WFGIEQEYTL LQRDVNWPLG
201: WPVGGYPGPQ GPYYCAVGSD KSFGRDISDA HYKACLYAGI NISGTNGEVM PGQWEYQVGP SVGIEAGDHI WISRYILERI TEQAGVVLTL DPKPIQGDWN
301: GAGCHTNYST KSMREDGGFE VIKKAILNLS LRHDLHISAY GEGNERRLTG LHETASIDNF SWGVANRGCS IRVGRDTEAK GKGYLEDRRP ASNMDPYVVT
401: ALLAETTILW EPTLEAEVLA AKKLALKV
001: MAQILAASPT CQMRVPKHSS VIASSSKLWS SVVLKQKKQS NNKVRGFRVL ALQSDNSTVN RVETLLNLDT KPYSDRIIAE YIWIGGSGID LRSKSRTIEK
101: PVEDPSELPK WNYDGSSTGQ APGEDSEVIL YPQAIFRDPF RGGNNILVIC DTWTPAGEPI PTNKRAKAAE IFSNKKVSGE VPWFGIEQEY TLLQQNVKWP
201: LGWPVGAFPG PQGPYYCGVG ADKIWGRDIS DAHYKACLYA GINISGTNGE VMPGQWEFQV GPSVGIDAGD HVWCARYLLE RITEQAGVVL TLDPKPIEGD
301: WNGAGCHTNY STKSMREEGG FEVIKKAILN LSLRHKEHIS AYGEGNERRL TGKHETASID QFSWGVANRG CSIRVGRDTE AKGKGYLEDR RPASNMDPYI
401: VTSLLAETTL LWEPTLEAEA LAAQKLSLNV
101: PVEDPSELPK WNYDGSSTGQ APGEDSEVIL YPQAIFRDPF RGGNNILVIC DTWTPAGEPI PTNKRAKAAE IFSNKKVSGE VPWFGIEQEY TLLQQNVKWP
201: LGWPVGAFPG PQGPYYCGVG ADKIWGRDIS DAHYKACLYA GINISGTNGE VMPGQWEFQV GPSVGIDAGD HVWCARYLLE RITEQAGVVL TLDPKPIEGD
301: WNGAGCHTNY STKSMREEGG FEVIKKAILN LSLRHKEHIS AYGEGNERRL TGKHETASID QFSWGVANRG CSIRVGRDTE AKGKGYLEDR RPASNMDPYI
401: VTSLLAETTL LWEPTLEAEA LAAQKLSLNV
Arabidopsis Description
GLN2Glutamine synthetase, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q43127]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.