CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX84116	Canola	plastid	48.95	37.65
PGSC0003DMT400045640	Potato	cytosol, plastid	34.21	30.95
KRH20936	Soybean	plastid	64.74	28.47
KRH11349	Soybean	plastid	63.16	27.78
KRH72975	Soybean	cytosol	34.21	25.69
CDY49365	Canola	plastid	50.0	24.11
Solyc01g080280.2.1	Tomato	plastid	54.74	24.07
Bra035392.1-P	Field mustard	plastid	51.58	22.9
CDX74644	Canola	plastid	51.58	22.9
Bra035529.1-P	Field mustard	plastid	51.05	22.66
TraesCS2B01G528300.1	Wheat	plastid	50.0	22.46
TraesCS2D01G500600.1	Wheat	plastid	50.0	22.25
TraesCS2A01G500400.1	Wheat	plastid	50.0	22.25
KXG27313	Sorghum	plastid	50.53	22.17
AT5G35630.1	Thale cress	plastid	50.0	22.09
Os04t0659100-01	Rice	plastid	48.95	21.73
KRH17323	Soybean	cytosol	38.95	20.79
KRH48674	Soybean	endoplasmic reticulum	38.42	20.51
KRH72976	Soybean	cytosol	38.42	20.51
KRH30929	Soybean	endoplasmic reticulum	37.89	20.22
KRH39031	Soybean	cytosol, nucleus	37.89	20.22
KRG97948	Soybean	cytosol, endoplasmic reticulum, nucleus	37.89	20.22
CDY33684	Canola	plastid	51.58	20.04
KRH17322	Soybean	cytosol	6.84	5.16
KRH12677	Soybean	extracellular	3.16	4.84
KRH71070	Soybean	extracellular	1.58	3.12

Protein Annotations

KEGG:00220+6.3.1.2	KEGG:00250+6.3.1.2	KEGG:00630+6.3.1.2	KEGG:00910+6.3.1.2	Gene3D:3.10.20.70	MapMan:35.1
UniProt:A0A0R0HGD5	EMBL:ACUP02007273	EnsemblPlantsGene:GLYMA_12G109200	GO:GO:0003674	GO:GO:0003824	GO:GO:0004356
GO:GO:0006542	GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:Gln_synt_N	InterPro:Gln_synth_N_conserv_site	InterPro:IPR036651	EnsemblPlants:KRH25519	ProteinID:KRH25519	ProteinID:KRH25519.1
ScanProsite:PS00180	PANTHER:PTHR20852	PANTHER:PTHR20852:SF53	MetaCyc:PWY-381	MetaCyc:PWY-5675	MetaCyc:PWY-6549
MetaCyc:PWY-6963	MetaCyc:PWY-6964	SUPFAM:SSF54368	UniParc:UPI0006EDAC5D	:	:

Description

hypothetical protein

Coordinates

chr12:-:10273564..10274569

Molecular Weight (calculated)

21366.3 Da

IEP (calculated)

8.756

GRAVY (calculated)

-0.481

Length

190 amino acids

Sequence
(BLAST)

001: EELQNMAQIL APSTQWQMRI SKSSPNATPI TSNMWGSLLW KQNKKVSLTS SAKFRVLAIK SDNSTINRLE GLLNLDITPF TDKIIAEYIW GIGIDVRSKS
101: RTISKPVEDP SKLPRWNYDG SSTGQAQGDN SEVILYPQAI FKDPYRGGNN ILVIYDSYTP QGEPIPSSLQ TRDTEIFSNP KVQAEVPWYI

Best Arabidopsis Sequence Match ( AT1G66200.1 )
(BLAST)

001: MSLLADLVNL DISDNSEKII AEYIWVGGSG MDMRSKARTL PGPVTDPSKL PKWNYDGSST GQAPGQDSEV ILYPQAIFKD PFRRGNNILV MCDAYTPAGE
101: PIPTNKRHAA AEIFANPDVI AEVPWYGIEQ EYTLLQKDVN WPLGWPIGGF PGPQGPYYCS IGADKSFGRD IVDAHYKASL YAGINISGIN GEVMPGQWEF
201: QVGPSVGISA ADEIWIARYI LERITEIAGV VVSFDPKPIP GDWNGAGAHT NYSTKSMREE GGYEIIKKAI EKLGLRHKEH ISAYGEGNER RLTGHHETAD
301: INTFLWGVAN RGASIRVGRD TEKEGKGYFE DRRPASNMDP YVVTSMIAET TLLWNP

Arabidopsis Description

ATGSR2Glutamine synthetase [Source:UniProtKB/TrEMBL;Acc:F4ID91]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.