Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX75942 | Canola | cytosol | 98.59 | 98.59 |
| CDX92165 | Canola | cytosol | 90.99 | 91.24 |
| CDX95818 | Canola | cytosol | 90.99 | 91.24 |
| CDY68590 | Canola | cytosol | 89.58 | 89.83 |
| CDY68179 | Canola | cytosol | 89.58 | 89.83 |
| AT3G17820.1 | Thale cress | cytosol | 88.45 | 88.7 |
| Bra001686.1-P | Field mustard | endoplasmic reticulum, golgi | 86.2 | 86.44 |
| CDX74573 | Canola | cytosol | 80.85 | 80.62 |
| CDY01727 | Canola | cytosol | 78.87 | 80.23 |
| Zm00001d051804_P001 | Maize | cytosol, extracellular, mitochondrion, plasma membrane | 80.28 | 80.06 |
| KXG30808 | Sorghum | cytosol | 80.28 | 80.06 |
| VIT_01s0011g02200.t01 | Wine grape | cytosol | 80.0 | 79.78 |
| TraesCS6A01G298100.2 | Wheat | cytosol | 79.72 | 79.49 |
| Os02t0735200-02 | Rice | cytosol | 79.72 | 79.49 |
| CDY16439 | Canola | cytosol | 79.44 | 79.21 |
| TraesCS6B01G327500.1 | Wheat | cytosol, golgi, plastid, unclear | 79.44 | 79.21 |
| CDY52941 | Canola | cytosol | 79.44 | 79.21 |
| CDX93671 | Canola | cytosol | 79.44 | 78.99 |
| CDY49672 | Canola | cytosol | 79.44 | 78.99 |
| CDY38104 | Canola | cytosol | 78.59 | 78.37 |
| CDX85499 | Canola | cytosol | 78.31 | 78.09 |
| CDY49656 | Canola | cytosol | 78.31 | 78.09 |
| CDX69442 | Canola | cytosol | 77.75 | 77.53 |
| Zm00001d017958_P002 | Maize | cytosol | 78.87 | 76.09 |
| HORVU6Hr1G074030.2 | Barley | cytosol, mitochondrion, plastid | 79.72 | 69.7 |
| Solyc12g041870.1.1 | Tomato | cytosol | 69.58 | 68.8 |
| CDY27610 | Canola | cytosol | 36.34 | 61.72 |
| CDY49365 | Canola | plastid | 67.32 | 60.66 |
| CDX84116 | Canola | plastid | 41.69 | 59.92 |
| CDX74644 | Canola | plastid | 70.7 | 58.64 |
| CDY27650 | Canola | mitochondrion | 27.61 | 57.99 |
| CDY33684 | Canola | plastid | 70.7 | 51.33 |
| CDX98429 | Canola | plastid | 21.69 | 36.67 |
Protein Annotations
| KEGG:00220+6.3.1.2 | KEGG:00250+6.3.1.2 | KEGG:00630+6.3.1.2 | KEGG:00910+6.3.1.2 | MapMan:25.1.5.1.1 | Gene3D:3.10.20.70 |
| Gene3D:3.30.590.40 | GO:A0A078D4Z2 | EnsemblPlants:CDX82343 | ProteinID:CDX82343 | ProteinID:CDX82343.1 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004356 | GO:GO:0006542 | GO:GO:0006807 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00137462001 | InterPro:Gln_synt_N | InterPro:Gln_synt_b-grasp | InterPro:Gln_synth/guanido_kin_cat_dom |
| InterPro:Gln_synth_N_conserv_site | InterPro:Gln_synth_cat_dom | InterPro:IPR036651 | PFAM:PF00120 | PFAM:PF03951 | ScanProsite:PS00180 |
| PANTHER:PTHR20852 | PANTHER:PTHR20852:SF59 | MetaCyc:PWY-381 | MetaCyc:PWY-5675 | MetaCyc:PWY-6549 | MetaCyc:PWY-6963 |
| MetaCyc:PWY-6964 | SMART:SM01230 | SUPFAM:SSF54368 | SUPFAM:SSF55931 | UniParc:UPI0004EE94CF | SEG:seg |
Description
BnaA03g34780D
Coordinates
chrLK031828:-:763133..765114
Molecular Weight (calculated)
38768.1 Da
IEP (calculated)
7.582
GRAVY (calculated)
-0.317
Length
355 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLLSDLVNL NLSDSTKQII AEYIWIGGSG MDIRSKARTL PGPVSDPSKL PKWNYDGSST GQASGDNSEV ILYPQAIFRD PFRRGDNILV MCDAYTPAGD
101: PIPTNKRHKA AKIFSHPNVA KEVPWYGIEQ EYTLMQKGVN WPIGWPIGGF PGPQGPYYCG VGADKAIGRD IVDAHYKACL YAGIGISGVN GEVMPGQWEF
201: QVGPVEGISS GDQVWVARYL LERITEISGV NVSFDPKPVP VSVSLPHSLN TLFITKSMRN NGGLAVIKNA IEKLQVKHKE NIAAYGEGSE RRLTGKHETA
301: YINTFSWGVA NRGASVRVGR DTEKEGKGYF EDRRPASNMD PYVVTSMIAE TTILG
101: PIPTNKRHKA AKIFSHPNVA KEVPWYGIEQ EYTLMQKGVN WPIGWPIGGF PGPQGPYYCG VGADKAIGRD IVDAHYKACL YAGIGISGVN GEVMPGQWEF
201: QVGPVEGISS GDQVWVARYL LERITEISGV NVSFDPKPVP VSVSLPHSLN TLFITKSMRN NGGLAVIKNA IEKLQVKHKE NIAAYGEGSE RRLTGKHETA
301: YINTFSWGVA NRGASVRVGR DTEKEGKGYF EDRRPASNMD PYVVTSMIAE TTILG
001: MSLLADLVNL DISDNSEKII AEYIWVGGSG MDMRSKARTL PGPVTDPSKL PKWNYDGSST GQAPGQDSEV ILYPQAIFKD PFRRGNNILV MCDAYTPAGE
101: PIPTNKRHAA AEIFANPDVI AEVPWYGIEQ EYTLLQKDVN WPLGWPIGGF PGPQGPYYCS IGADKSFGRD IVDAHYKASL YAGINISGIN GEVMPGQWEF
201: QVGPSVGISA ADEIWIARYI LERITEIAGV VVSFDPKPIP GDWNGAGAHT NYSTKSMREE GGYEIIKKAI EKLGLRHKEH ISAYGEGNER RLTGHHETAD
301: INTFLWGVAN RGASIRVGRD TEKEGKGYFE DRRPASNMDP YVVTSMIAET TLLWNP
101: PIPTNKRHAA AEIFANPDVI AEVPWYGIEQ EYTLLQKDVN WPLGWPIGGF PGPQGPYYCS IGADKSFGRD IVDAHYKASL YAGINISGIN GEVMPGQWEF
201: QVGPSVGISA ADEIWIARYI LERITEIAGV VVSFDPKPIP GDWNGAGAHT NYSTKSMREE GGYEIIKKAI EKLGLRHKEH ISAYGEGNER RLTGHHETAD
301: INTFLWGVAN RGASIRVGRD TEKEGKGYFE DRRPASNMDP YVVTSMIAET TLLWNP
Arabidopsis Description
ATGSR2Glutamine synthetase [Source:UniProtKB/TrEMBL;Acc:F4ID91]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.