Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d051804_P001 | Maize | cytosol, extracellular, mitochondrion, plasma membrane | 94.02 | 97.19 |
| KXG30808 | Sorghum | cytosol | 91.85 | 94.94 |
| Os02t0735200-02 | Rice | cytosol | 90.49 | 93.54 |
| TraesCS6A01G298100.2 | Wheat | cytosol | 87.5 | 90.45 |
| TraesCS6B01G327500.1 | Wheat | cytosol, golgi, plastid, unclear | 87.23 | 90.17 |
| VIT_01s0011g02200.t01 | Wine grape | cytosol | 84.51 | 87.36 |
| KRH48674 | Soybean | endoplasmic reticulum | 84.51 | 87.36 |
| KRH39031 | Soybean | cytosol, nucleus | 83.97 | 86.8 |
| AT3G17820.1 | Thale cress | cytosol | 81.52 | 84.75 |
| CDX92165 | Canola | cytosol | 80.71 | 83.9 |
| CDX95818 | Canola | cytosol | 80.71 | 83.9 |
| Bra022247.1-P | Field mustard | cytosol | 80.71 | 83.9 |
| CDY68179 | Canola | cytosol | 79.35 | 82.49 |
| CDY68590 | Canola | cytosol | 79.35 | 82.49 |
| Bra021276.1-P | Field mustard | cytosol | 79.08 | 82.2 |
| Zm00001d033747_P001 | Maize | cytosol, extracellular | 81.25 | 81.03 |
| HORVU6Hr1G074030.2 | Barley | cytosol, mitochondrion, plastid | 87.77 | 79.56 |
| CDX75942 | Canola | cytosol | 76.63 | 79.44 |
| CDX82343 | Canola | cytosol | 76.09 | 78.87 |
| PGSC0003DMT400037457 | Potato | cytosol, plastid | 67.93 | 78.37 |
| Bra018729.1-P | Field mustard | cytosol | 74.73 | 78.12 |
| AT1G48470.1 | Thale cress | cytosol | 74.73 | 77.9 |
| CDX93671 | Canola | cytosol | 74.73 | 77.03 |
| CDY49672 | Canola | cytosol | 74.73 | 77.03 |
| Bra001686.1-P | Field mustard | endoplasmic reticulum, golgi | 73.1 | 75.99 |
| Solyc12g041870.1.1 | Tomato | cytosol | 73.64 | 75.49 |
| Zm00001d048050_P004 | Maize | cytosol | 69.84 | 74.49 |
| Zm00001d028260_P005 | Maize | cytosol | 77.99 | 73.4 |
| Bra032257.1-P | Field mustard | cytosol | 27.99 | 60.59 |
| CDY27610 | Canola | cytosol | 32.34 | 56.94 |
| PGSC0003DMT400036605 | Potato | cytosol | 13.04 | 54.55 |
| CDY27650 | Canola | mitochondrion | 24.73 | 53.85 |
| CDX98429 | Canola | plastid | 21.47 | 37.62 |
Protein Annotations
| KEGG:00220+6.3.1.2 | KEGG:00250+6.3.1.2 | KEGG:00630+6.3.1.2 | KEGG:00910+6.3.1.2 | MapMan:25.1.5.1.1 | Gene3D:3.10.20.70 |
| Gene3D:3.30.590.40 | EntrezGene:542214 | UniProt:A0A1D6HJJ4 | ProteinID:AQK74643.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004356 | GO:GO:0006542 | GO:GO:0006807 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:Gln_synt_N | InterPro:Gln_synth/guanido_kin_cat_dom | InterPro:Gln_synth_cat_dom | InterPro:Gln_synth_gly_rich_site | InterPro:IPR036651 |
| PFAM:PF00120 | ScanProsite:PS00181 | PANTHER:PTHR20852 | PANTHER:PTHR20852:SF59 | SMART:SM01230 | SUPFAM:SSF54368 |
| SUPFAM:SSF55931 | UniParc:UPI000843FEBE | EnsemblPlantsGene:Zm00001d017958 | EnsemblPlants:Zm00001d017958_P002 | EnsemblPlants:Zm00001d017958_T002 | : |
Description
glutamine synthetase4Glutamine synthetase root isozyme 3
Coordinates
chr5:-:210867625..210871221
Molecular Weight (calculated)
40561.7 Da
IEP (calculated)
5.295
GRAVY (calculated)
-0.472
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MACLTDLVNL NLSDNTEKII AEYIWIGGSG MDLRSKARTL SGPVTDPSKL PKWNYDGSST GQAPGEDSEQ TWERSLSLGH VAPCSPQAIF KDPFRRGNNI
101: LVMCDCYTPA GEPIPTNKRY NAAKIFSSPE VAAEEPWYGI EQEYTLLQKD TNWPLGWPIG GFPGPQGPYY CGIGAEKSFG RDIVDAHYKA CLYAGINISG
201: INGEVMPGQW EFQVGPSVGI SSGDQVWVAR YILERITEIA GVVVTFDPKP IPGDWNGAGA HTNYSTESMR KEGGYEVIKA AIEKLKLRHR EHIAAYGEGN
301: ERRLTGRHET ADINTFSWGV ANRGASVRVG RETEQNGKGY FEDRRPASNM DPYVVTSMIA ETTIIWKP
101: LVMCDCYTPA GEPIPTNKRY NAAKIFSSPE VAAEEPWYGI EQEYTLLQKD TNWPLGWPIG GFPGPQGPYY CGIGAEKSFG RDIVDAHYKA CLYAGINISG
201: INGEVMPGQW EFQVGPSVGI SSGDQVWVAR YILERITEIA GVVVTFDPKP IPGDWNGAGA HTNYSTESMR KEGGYEVIKA AIEKLKLRHR EHIAAYGEGN
301: ERRLTGRHET ADINTFSWGV ANRGASVRVG RETEQNGKGY FEDRRPASNM DPYVVTSMIA ETTIIWKP
001: MSLLADLVNL DISDNSEKII AEYIWVGGSG MDMRSKARTL PGPVTDPSKL PKWNYDGSST GQAPGQDSEV ILYPQAIFKD PFRRGNNILV MCDAYTPAGE
101: PIPTNKRHAA AEIFANPDVI AEVPWYGIEQ EYTLLQKDVN WPLGWPIGGF PGPQGPYYCS IGADKSFGRD IVDAHYKASL YAGINISGIN GEVMPGQWEF
201: QVGPSVGISA ADEIWIARYI LERITEIAGV VVSFDPKPIP GDWNGAGAHT NYSTKSMREE GGYEIIKKAI EKLGLRHKEH ISAYGEGNER RLTGHHETAD
301: INTFLWGVAN RGASIRVGRD TEKEGKGYFE DRRPASNMDP YVVTSMIAET TLLWNP
101: PIPTNKRHAA AEIFANPDVI AEVPWYGIEQ EYTLLQKDVN WPLGWPIGGF PGPQGPYYCS IGADKSFGRD IVDAHYKASL YAGINISGIN GEVMPGQWEF
201: QVGPSVGISA ADEIWIARYI LERITEIAGV VVSFDPKPIP GDWNGAGAHT NYSTKSMREE GGYEIIKKAI EKLGLRHKEH ISAYGEGNER RLTGHHETAD
301: INTFLWGVAN RGASIRVGRD TEKEGKGYFE DRRPASNMDP YVVTSMIAET TLLWNP
Arabidopsis Description
ATGSR2Glutamine synthetase [Source:UniProtKB/TrEMBL;Acc:F4ID91]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.