Factsheet for Zm00001d028260_P005

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU92979	Sorghum	cytosol	84.65	92.72
Os03t0223400-01	Rice	cytosol, plasma membrane	78.77	86.27
GSMUA_AchrUn_...	Banana	cytosol	77.24	84.83
TraesCS4A01G063800.1	Wheat	cytosol	75.96	83.9
GSMUA_Achr3P07420_001	Banana	cytosol, plasma membrane	76.21	83.71
TraesCS4D01G240700.1	Wheat	cytosol	75.7	83.62
TraesCS4B01G240900.1	Wheat	cytosol, golgi	75.7	83.62
GSMUA_Achr3P20250_001	Banana	cytosol, plasma membrane	75.7	83.15
KRH30929	Soybean	endoplasmic reticulum	75.7	83.15
VIT_14s0006g00350.t01	Wine grape	cytosol	74.68	82.02
Zm00001d051804_P001	Maize	cytosol, extracellular, mitochondrion, plasma membrane	74.68	82.02
KRG97948	Soybean	cytosol, endoplasmic reticulum, nucleus	74.17	81.46
Zm00001d048050_P004	Maize	cytosol	71.1	80.58
KRH17323	Soybean	cytosol	73.15	80.34
KRH72976	Soybean	cytosol	72.63	79.78
Zm00001d017958_P002	Maize	cytosol	73.4	77.99
HORVU4Hr1G066860.5	Barley	plasma membrane	75.19	76.76
Zm00001d033747_P001	Maize	cytosol, extracellular	71.36	75.61
KRH72975	Soybean	cytosol	43.22	66.8
KRH17322	Soybean	cytosol	37.6	58.33

Protein Annotations

KEGG:00220+6.3.1.2	KEGG:00250+6.3.1.2	KEGG:00630+6.3.1.2	KEGG:00910+6.3.1.2	Gene3D:3.10.20.70	Gene3D:3.30.590.40
MapMan:50.6.3	UniProt:A0A1D6JTN6	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004356
GO:GO:0005488	GO:GO:0005524	GO:GO:0006542	GO:GO:0006807	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016874	InterPro:Gln_synt_N	InterPro:Gln_synt_b-grasp	InterPro:Gln_synth/guanido_kin_cat_dom
InterPro:Gln_synth_N_conserv_site	InterPro:Gln_synth_cat_dom	InterPro:Gln_synth_gly_rich_site	InterPro:IPR036651	ProteinID:ONL95213.1	PFAM:PF00120
PFAM:PF03951	ScanProsite:PS00180	ScanProsite:PS00181	PANTHER:PTHR20852	PANTHER:PTHR20852:SF78	SMART:SM01230
SUPFAM:SSF54368	SUPFAM:SSF55931	UniParc:UPI000843F27C	EnsemblPlantsGene:Zm00001d028260	EnsemblPlants:Zm00001d028260_P005	EnsemblPlants:Zm00001d028260_T005

Description

glutamine synthetase6 glutamine synthetase6

Coordinates

chr1:-:28169402..28171917

Molecular Weight (calculated)

43263.4 Da

IEP (calculated)

5.674

GRAVY (calculated)

-0.309

Length

391 amino acids

Sequence
(BLAST)

001: MASLTDLVNL DLSDCTDRII AEYIWIGGTG IDLRSKARTV KGPITDPSQL PKWNYDGSST GQAPGEDSEV ILYPQAIFKD PFRKGNHILV MCDCYTPQGE
101: PIPTNKRYSA AKVFSHPDVA AEVPCFLPYL VPHQDDLRLD WNRYGIEQEY TLLQKDGPYY CAAGADKAFG RDVVDAHYKA CLYAGINISG INGEVMPGQW
201: EFQVGPSVGI SAGDEIWVAR YILERITEMA GIVLSLDPKP IKGDWNGAGA HTNYSTKSMR EAGGYEVIKA AIDKLGKRHK EHIAAYGEGN ERRLTGRHET
301: ADINTFKWVG CFFLMRCEMV SVPLADSLTF VGVRYGVVLQ GVANRGASIR VGRDTEREGK GYFEDRRPAS NMDPYVVTGM IAETTILWNG N

Best Arabidopsis Sequence Match ( AT1G66200.1 )
(BLAST)

001: MSLLADLVNL DISDNSEKII AEYIWVGGSG MDMRSKARTL PGPVTDPSKL PKWNYDGSST GQAPGQDSEV ILYPQAIFKD PFRRGNNILV MCDAYTPAGE
101: PIPTNKRHAA AEIFANPDVI AEVPWYGIEQ EYTLLQKDVN WPLGWPIGGF PGPQGPYYCS IGADKSFGRD IVDAHYKASL YAGINISGIN GEVMPGQWEF
201: QVGPSVGISA ADEIWIARYI LERITEIAGV VVSFDPKPIP GDWNGAGAHT NYSTKSMREE GGYEIIKKAI EKLGLRHKEH ISAYGEGNER RLTGHHETAD
301: INTFLWGVAN RGASIRVGRD TEKEGKGYFE DRRPASNMDP YVVTSMIAET TLLWNP

Arabidopsis Description

ATGSR2Glutamine synthetase [Source:UniProtKB/TrEMBL;Acc:F4ID91]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.